Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4 313 5e-83 seq1 313 5e-83 >seq4 Length=64497 Score = 313 bits (346), Expect = 5e-83 Identities = 272/335 (81%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| || ||||||| | ||||||||||||||||||| Sbjct 28352 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGCATAG-CTGGATCAGGCTTTCGCCC 28295 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 28294 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 28235 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||| ||| || |||| | |||||||| ||| |||||| | Sbjct 28234 TGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTA 28175 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| | ||||||||||| ||| |||| || | || Sbjct 28174 CCAACAAGCTAATCTAATATAGGCTCATCTAATA--GCAA-----TAAATT-------TT 28129 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || ||||| || ||||| ||||||||| |||||||| | |||| || ||||| || Sbjct 28128 TCCCCCGTGGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAG 28069 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| ||||||||||||||| ||| || Sbjct 28068 GTAGATTCCTATACATTACTCACCCGTCTGCCACT 28034 >seq1 Length=2798100 Score = 313 bits (346), Expect = 5e-83 Identities = 272/335 (81%), Gaps = 16/335 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| || ||||||| | ||||||||||||||||||| Sbjct 1540030 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGCATAG-CTGGATCAGGCTTTCGCCC 1540087 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1540088 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 1540147 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||| ||| || |||| | |||||||| ||| |||||| | Sbjct 1540148 TGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTA 1540207 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| | ||||||||||| ||| |||| || | || Sbjct 1540208 CCAACAAGCTAATCTAATATAGGCTCATCTAATA--GCAA-----TAAATT-------TT 1540253 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || ||||| || ||||| ||||||||| |||||||| | |||| || ||||| || Sbjct 1540254 TCCCCCGTGGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAG 1540313 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| ||||||||||||||| ||| || Sbjct 1540314 GTAGATTCCTATACATTACTCACCCGTCTGCCACT 1540348 Score = 313 bits (346), Expect = 5e-83 Identities = 272/335 (81%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| || ||||||| | ||||||||||||||||||| Sbjct 2430702 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGCATAG-CTGGATCAGGCTTTCGCCC 2430645 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2430644 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 2430585 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||| ||| || |||| | |||||||| ||| |||||| | Sbjct 2430584 TGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTA 2430525 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| | ||||||||||| ||| |||| || | || Sbjct 2430524 CCAACAAGCTAATCTAATATAGGCTCATCTAATA--GCAA-----TAAATT-------TT 2430479 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || ||||| || ||||| ||||||||| |||||||| | |||| || ||||| || Sbjct 2430478 TCCCCCGTGGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAG 2430419 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| ||||||||||||||| ||| || Sbjct 2430418 GTAGATTCCTATACATTACTCACCCGTCTGCCACT 2430384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071977530880