Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1 349 1e-93 >seq1 Length=2798100 Score = 349 bits (386), Expect = 1e-93 Identities = 424/574 (74%), Gaps = 29/574 (5%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||||||| ||||| |||||| | || |||||||| | ||||||||| Sbjct 1123386 GGTATTCGGAGTTTGGTTAGATTT-GGTAAGATGATGAATCCCCCTAGTCTATCCAGTGC 1123328 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| || || | ||| | ||||| |||||||| |||||| |||||||||||| Sbjct 1123327 TCTACCCCCAACAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 1123268 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | ||||||||||||||||||||||||| |||| |||||| | | || |||| Sbjct 1123267 ATTTCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACA 1123208 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | |||||| ||||||| || ||||| |||||| ||| |||| |||||| Sbjct 1123207 TTAACTGGTTCGATCCTCCAGTGTGTTTTACCACACCTTCAATCTGGTCATGACTAGATC 1123148 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 |||| | ||||||||| | | ||| | ||||||||||| |||| ||||||||||| Sbjct 1123147 ACTTGGTTTCGGGTCTAATCCATAAAACTAAAACGCCCTATTCAGACTTGCTTTCGCTAC 1123088 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 | |||| || |||| |||| || || || | ||||||| | | |||| | |||| Sbjct 1123087 GCCTACACCTAACGGCTTAAGCTTGCTTCA-TAGATTAACTCGCTGACCCATTATGCAAA 1123029 Query 411 AGGCACGCCGTCAC-CTGGTAC-------CTAAAAG---GCACTT--------------C 445 ||| |||| ||||| || ||| ||| ||| || ||| Sbjct 1123028 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 1122969 Query 446 AGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTAC 505 |||||| || | ||||| |||| | |||||| | |||||||||||||| || ||||| | Sbjct 1122968 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTCCCGGGGTTC 1122909 Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||| Sbjct 1122908 TTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTTG 1122849 Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||||||| ||| ||||| || |||||| Sbjct 1122848 GAGGATGGTCCCCCCATATTCAAACAGGATTTCA 1122815 Score = 349 bits (386), Expect = 1e-93 Identities = 424/574 (74%), Gaps = 29/574 (5%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||||||| ||||| |||||| | || |||||||| | ||||||||| Sbjct 2121276 GGTATTCGGAGTTTGGTTAGATTT-GGTAAGATGATGAATCCCCCTAGTCTATCCAGTGC 2121334 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| || || | ||| | ||||| |||||||| |||||| |||||||||||| Sbjct 2121335 TCTACCCCCAACAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 2121394 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | ||||||||||||||||||||||||| |||| |||||| | | || |||| Sbjct 2121395 ATTTCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACA 2121454 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | |||||| ||||||| || ||||| |||||| ||| |||| |||||| Sbjct 2121455 TTAACTGGTTCGATCCTCCAGTGTGTTTTACCACACCTTCAATCTGGTCATGACTAGATC 2121514 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 |||| | ||||||||| | | ||| | ||||||||||| |||| ||||||||||| Sbjct 2121515 ACTTGGTTTCGGGTCTAATCCATAAAACTAAAACGCCCTATTCAGACTTGCTTTCGCTAC 2121574 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 | |||| || |||| |||| || || || | ||||||| | | |||| | |||| Sbjct 2121575 GCCTACACCTAACGGCTTAAGCTTGCTTCA-TAGATTAACTCGCTGACCCATTATGCAAA 2121633 Query 411 AGGCACGCCGTCAC-CTGGTAC-------CTAAAAG---GCACTT--------------C 445 ||| |||| ||||| || ||| ||| ||| || ||| Sbjct 2121634 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 2121693 Query 446 AGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTAC 505 |||||| || | ||||| |||| | |||||| | |||||||||||||| || ||||| | Sbjct 2121694 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTCCCGGGGTTC 2121753 Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||| Sbjct 2121754 TTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTTG 2121813 Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||||||| ||| ||||| || |||||| Sbjct 2121814 GAGGATGGTCCCCCCATATTCAAACAGGATTTCA 2121847 Score = 349 bits (386), Expect = 1e-93 Identities = 424/574 (74%), Gaps = 29/574 (5%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||||||| ||||| |||||| | || |||||||| | ||||||||| Sbjct 2785377 GGTATTCGGAGTTTGGTTAGATTT-GGTAAGATGATGAATCCCCCTAGTCTATCCAGTGC 2785435 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| || || | ||| | ||||| |||||||| |||||| |||||||||||| Sbjct 2785436 TCTACCCCCAACAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 2785495 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | ||||||||||||||||||||||||| |||| |||||| | | || |||| Sbjct 2785496 ATTTCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACA 2785555 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | |||||| ||||||| || ||||| |||||| ||| |||| |||||| Sbjct 2785556 TTAACTGGTTCGATCCTCCAGTGTGTTTTACCACACCTTCAATCTGGTCATGACTAGATC 2785615 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 |||| | ||||||||| | | ||| | ||||||||||| |||| ||||||||||| Sbjct 2785616 ACTTGGTTTCGGGTCTAATCCATAAAACTAAAACGCCCTATTCAGACTTGCTTTCGCTAC 2785675 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 | |||| || |||| |||| || || || | ||||||| | | |||| | |||| Sbjct 2785676 GCCTACACCTAACGGCTTAAGCTTGCTTCA-TAGATTAACTCGCTGACCCATTATGCAAA 2785734 Query 411 AGGCACGCCGTCAC-CTGGTAC-------CTAAAAG---GCACTT--------------C 445 ||| |||| ||||| || ||| ||| ||| || ||| Sbjct 2785735 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 2785794 Query 446 AGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTAC 505 |||||| || | ||||| |||| | |||||| | |||||||||||||| || ||||| | Sbjct 2785795 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTCCCGGGGTTC 2785854 Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||| Sbjct 2785855 TTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTTG 2785914 Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||||||| ||| ||||| || |||||| Sbjct 2785915 GAGGATGGTCCCCCCATATTCAAACAGGATTTCA 2785948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817561903104