Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1 233 5e-59 >seq1 Length=2798100 Score = 233 bits (258), Expect = 5e-59 Identities = 302/412 (73%), Gaps = 45/412 (11%) Strand=Plus/Minus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 1123201 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 1123145 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| |||||||| | | | |||| | ||||||| | ||||| ||||| |||||| Sbjct 1123144 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTTGCTTT-CGCTAC 1123088 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| || | | | ||| ||||||||||||||| |||| Sbjct 1123087 GCCTACACCTAACGGCTTAAGCTT-GCTTCATAGATTAACTCGCTGACCCATTATGCAAA 1123029 Query 223 AGGTACGCAGTCACCCAA---CAAAGT--------------------------------G 247 |||||||| ||||| | | |||| | | Sbjct 1123028 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 1122969 Query 248 GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307 ||||| |||| ||||| ||| || |||||| ||||||||||||||||| |||||||| Sbjct 1122968 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTT 1122910 Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||||||||||||||||| |||||||||||||| | || ||||||||| ||| Sbjct 1122909 CTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTT 1122850 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| ||| |||| ||||| ||| |||||| Sbjct 1122849 GGAGGATGGTCCCCCCATATTCAAACAGGATTTCACGTGCCCCGCTCTACTC 1122798 Score = 233 bits (258), Expect = 5e-59 Identities = 302/412 (73%), Gaps = 45/412 (11%) Strand=Plus/Plus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 2121461 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 2121517 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| |||||||| | | | |||| | ||||||| | ||||| ||||| |||||| Sbjct 2121518 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTTGCTTT-CGCTAC 2121574 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| || | | | ||| ||||||||||||||| |||| Sbjct 2121575 GCCTACACCTAACGGCTTAAGCTT-GCTTCATAGATTAACTCGCTGACCCATTATGCAAA 2121633 Query 223 AGGTACGCAGTCACCCAA---CAAAGT--------------------------------G 247 |||||||| ||||| | | |||| | | Sbjct 2121634 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 2121693 Query 248 GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307 ||||| |||| ||||| ||| || |||||| ||||||||||||||||| |||||||| Sbjct 2121694 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTT 2121752 Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||||||||||||||||| |||||||||||||| | || ||||||||| ||| Sbjct 2121753 CTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTT 2121812 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| ||| |||| ||||| ||| |||||| Sbjct 2121813 GGAGGATGGTCCCCCCATATTCAAACAGGATTTCACGTGCCCCGCTCTACTC 2121864 Score = 233 bits (258), Expect = 5e-59 Identities = 302/412 (73%), Gaps = 45/412 (11%) Strand=Plus/Plus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 2785562 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 2785618 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| |||||||| | | | |||| | ||||||| | ||||| ||||| |||||| Sbjct 2785619 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTTGCTTT-CGCTAC 2785675 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| || | | | ||| ||||||||||||||| |||| Sbjct 2785676 GCCTACACCTAACGGCTTAAGCTT-GCTTCATAGATTAACTCGCTGACCCATTATGCAAA 2785734 Query 223 AGGTACGCAGTCACCCAA---CAAAGT--------------------------------G 247 |||||||| ||||| | | |||| | | Sbjct 2785735 AGGTACGCTGTCACTCTAATACAAACTAACTACAAGATTGCTCTTGTAGGAAAAGCATAG 2785794 Query 248 GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307 ||||| |||| ||||| ||| || |||||| ||||||||||||||||| |||||||| Sbjct 2785795 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTT 2785853 Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||||||||||||||||| |||||||||||||| | || ||||||||| ||| Sbjct 2785854 CTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTT 2785913 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| ||| |||| ||||| ||| |||||| Sbjct 2785914 GGAGGATGGTCCCCCCATATTCAAACAGGATTTCACGTGCCCCGCTCTACTC 2785965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241573976064