Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4 163 6e-38 seq1 163 6e-38 >seq4 Length=64497 Score = 163 bits (180), Expect = 6e-38 Identities = 245/346 (71%), Gaps = 23/346 (7%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 28320 GGCATAGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 28261 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 28260 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 28201 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| ||||||| | |||||| | |||||| || ||||| | Sbjct 28200 CATTGCCTTGGTAAGCTATTACCCTACCAACAAGCTAATCTAATATAGGCTCATCTAATA 28141 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 28140 GCAATAAATTTTT---------------CCCCCGTGGGGC-GTATACGGTATTAGTTGCC 28097 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 28096 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 28038 Query 301 CACTAAGCTATATATCC--AGCAAGCTTTCAACATAGCTCCGTTCG 344 |||||| |||| || ||||||| | ||| ||| |||||||| Sbjct 28037 CACTAAATTATA---CCGTAGCAAGC-TACAATATAATTCCGTTCG 27996 >seq1 Length=2798100 Score = 163 bits (180), Expect = 6e-38 Identities = 245/346 (71%), Gaps = 23/346 (7%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 1540062 GGCATAGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 1540121 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 1540122 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 1540181 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| ||||||| | |||||| | |||||| || ||||| | Sbjct 1540182 CATTGCCTTGGTAAGCTATTACCCTACCAACAAGCTAATCTAATATAGGCTCATCTAATA 1540241 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 1540242 GCAATAAATTTTT---------------CCCCCGTGGGGC-GTATACGGTATTAGTTGCC 1540285 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 1540286 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 1540344 Query 301 CACTAAGCTATATATCC--AGCAAGCTTTCAACATAGCTCCGTTCG 344 |||||| |||| || ||||||| | ||| ||| |||||||| Sbjct 1540345 CACTAAATTATA---CCGTAGCAAGC-TACAATATAATTCCGTTCG 1540386 Score = 163 bits (180), Expect = 6e-38 Identities = 245/346 (71%), Gaps = 23/346 (7%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 2430670 GGCATAGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 2430611 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 2430610 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 2430551 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| ||||||| | |||||| | |||||| || ||||| | Sbjct 2430550 CATTGCCTTGGTAAGCTATTACCCTACCAACAAGCTAATCTAATATAGGCTCATCTAATA 2430491 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 2430490 GCAATAAATTTTT---------------CCCCCGTGGGGC-GTATACGGTATTAGTTGCC 2430447 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 2430446 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 2430388 Query 301 CACTAAGCTATATATCC--AGCAAGCTTTCAACATAGCTCCGTTCG 344 |||||| |||| || ||||||| | ||| ||| |||||||| Sbjct 2430387 CACTAAATTATA---CCGTAGCAAGC-TACAATATAATTCCGTTCG 2430346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998379073536