Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1 163 7e-38 >seq1 Length=2798100 Score = 163 bits (180), Expect = 7e-38 Identities = 290/419 (69%), Gaps = 22/419 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTC-GGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGAC 59 ||||||| ||| | || |||||||||||| |||||| |||| ||||| ||||| || Sbjct 1123853 CGACTACTCCTTTATGGACTCGCCTTAGGAACCGACTAACCCTACGCAGATTAACTTAAC 1123794 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCC 118 ||||||||| ||| | || | | | || ||| | | |||||||| ||| | Sbjct 1123793 GTAGGAACCCTTAGATTTTTGGTGAGAGTGTTTTTCACACTCTTTTACGCTACTTATGTC 1123734 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACAC 177 ||||||||||| | | ||||| || | || | | |||||| ||| || Sbjct 1123733 AGCATTCTCACTTCCGATATCTCCAGCAGTCC-TCTCAAACTACCTTCACAGACTTACGG 1123675 Query 178 GACGCTCCCCTACC-CAACCAC------------ACAGGTTGCCACAGCTTCGGCGGATA 224 ||||||| ||||| || ||| ||| || ||| |||||| | | Sbjct 1123674 AACGCTCCGCTACCGCACCCATTGATCGAAATCAACAAGTACTTACATCTTCGGTATACA 1123615 Query 225 ACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACG 279 ||| ||||||| |||||| ||||||| ||| |||| ||| |||||||| ||||| Sbjct 1123614 GCTTTAGCCCCGGTACATTTTCGGCGCAGAAAAACTTATTTAGACAAGTGAGCTGTTACG 1123555 Query 280 CACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACAT 339 | ||||| ||||||||||||||||||||||||||||| | ||| | || || | Sbjct 1123554 CTTTCTTTAAAGGATGGCTGCTTCCAAGCCAACCTCCTAGCTGTAATGGTTTTTCTACTT 1123495 Query 340 CCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||| |||||| || | | || ||| |||||| | ||||||||| ||||||||||| Sbjct 1123494 CCTTCCCCACTTAGCTGCAATTTTGGGACCTTAGATAGTGATCTGGGTTGTTTCCCTCT 1123436 Score = 163 bits (180), Expect = 7e-38 Identities = 290/419 (69%), Gaps = 22/419 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTC-GGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGAC 59 ||||||| ||| | || |||||||||||| |||||| |||| ||||| ||||| || Sbjct 2120809 CGACTACTCCTTTATGGACTCGCCTTAGGAACCGACTAACCCTACGCAGATTAACTTAAC 2120868 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCC 118 ||||||||| ||| | || | | | || ||| | | |||||||| ||| | Sbjct 2120869 GTAGGAACCCTTAGATTTTTGGTGAGAGTGTTTTTCACACTCTTTTACGCTACTTATGTC 2120928 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACAC 177 ||||||||||| | | ||||| || | || | | |||||| ||| || Sbjct 2120929 AGCATTCTCACTTCCGATATCTCCAGCAGTCC-TCTCAAACTACCTTCACAGACTTACGG 2120987 Query 178 GACGCTCCCCTACC-CAACCAC------------ACAGGTTGCCACAGCTTCGGCGGATA 224 ||||||| ||||| || ||| ||| || ||| |||||| | | Sbjct 2120988 AACGCTCCGCTACCGCACCCATTGATCGAAATCAACAAGTACTTACATCTTCGGTATACA 2121047 Query 225 ACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACG 279 ||| ||||||| |||||| ||||||| ||| |||| ||| |||||||| ||||| Sbjct 2121048 GCTTTAGCCCCGGTACATTTTCGGCGCAGAAAAACTTATTTAGACAAGTGAGCTGTTACG 2121107 Query 280 CACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACAT 339 | ||||| ||||||||||||||||||||||||||||| | ||| | || || | Sbjct 2121108 CTTTCTTTAAAGGATGGCTGCTTCCAAGCCAACCTCCTAGCTGTAATGGTTTTTCTACTT 2121167 Query 340 CCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||| |||||| || | | || ||| |||||| | ||||||||| ||||||||||| Sbjct 2121168 CCTTCCCCACTTAGCTGCAATTTTGGGACCTTAGATAGTGATCTGGGTTGTTTCCCTCT 2121226 Score = 163 bits (180), Expect = 7e-38 Identities = 290/419 (69%), Gaps = 22/419 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTC-GGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGAC 59 ||||||| ||| | || |||||||||||| |||||| |||| ||||| ||||| || Sbjct 2784910 CGACTACTCCTTTATGGACTCGCCTTAGGAACCGACTAACCCTACGCAGATTAACTTAAC 2784969 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCC 118 ||||||||| ||| | || | | | || ||| | | |||||||| ||| | Sbjct 2784970 GTAGGAACCCTTAGATTTTTGGTGAGAGTGTTTTTCACACTCTTTTACGCTACTTATGTC 2785029 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACAC 177 ||||||||||| | | ||||| || | || | | |||||| ||| || Sbjct 2785030 AGCATTCTCACTTCCGATATCTCCAGCAGTCC-TCTCAAACTACCTTCACAGACTTACGG 2785088 Query 178 GACGCTCCCCTACC-CAACCAC------------ACAGGTTGCCACAGCTTCGGCGGATA 224 ||||||| ||||| || ||| ||| || ||| |||||| | | Sbjct 2785089 AACGCTCCGCTACCGCACCCATTGATCGAAATCAACAAGTACTTACATCTTCGGTATACA 2785148 Query 225 ACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACG 279 ||| ||||||| |||||| ||||||| ||| |||| ||| |||||||| ||||| Sbjct 2785149 GCTTTAGCCCCGGTACATTTTCGGCGCAGAAAAACTTATTTAGACAAGTGAGCTGTTACG 2785208 Query 280 CACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACAT 339 | ||||| ||||||||||||||||||||||||||||| | ||| | || || | Sbjct 2785209 CTTTCTTTAAAGGATGGCTGCTTCCAAGCCAACCTCCTAGCTGTAATGGTTTTTCTACTT 2785268 Query 340 CCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||| |||||| || | | || ||| |||||| | ||||||||| ||||||||||| Sbjct 2785269 CCTTCCCCACTTAGCTGCAATTTTGGGACCTTAGATAGTGATCTGGGTTGTTTCCCTCT 2785327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177575317504