Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq4 141 8e-32 seq1 141 8e-32 >seq4 Length=64497 Score = 141 bits (156), Expect = 8e-32 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| ||| |||||||||| ||||||| Sbjct 29219 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGGCTTTTAAGGGATTAGCTTAGCCTCGCG 29160 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || || |||| |||| ||||||||| ||||||| ||||| |||||||||||| Sbjct 29159 ACTTTGCAGCCCATTGTAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAGGGCCA 29100 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||| |||||||||||||||||| |||| |||| Sbjct 29099 TGATGACTTGACATCATCCCCACCTTCCTCCAGTTTATCAC 29059 >seq1 Length=2798100 Score = 141 bits (156), Expect = 8e-32 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| ||| |||||||||| ||||||| Sbjct 1539163 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGGCTTTTAAGGGATTAGCTTAGCCTCGCG 1539222 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || || |||| |||| ||||||||| ||||||| ||||| |||||||||||| Sbjct 1539223 ACTTTGCAGCCCATTGTAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAGGGCCA 1539282 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||| |||||||||||||||||| |||| |||| Sbjct 1539283 TGATGACTTGACATCATCCCCACCTTCCTCCAGTTTATCAC 1539323 Score = 141 bits (156), Expect = 8e-32 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| ||| |||||||||| ||||||| Sbjct 2431569 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGGCTTTTAAGGGATTAGCTTAGCCTCGCG 2431510 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || || |||| |||| ||||||||| ||||||| ||||| |||||||||||| Sbjct 2431509 ACTTTGCAGCCCATTGTAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAGGGCCA 2431450 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||| |||||||||||||||||| |||| |||| Sbjct 2431449 TGATGACTTGACATCATCCCCACCTTCCTCCAGTTTATCAC 2431409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415991553120