Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq4 194 3e-47 seq1 194 3e-47 >seq4 Length=64497 Score = 194 bits (214), Expect = 3e-47 Identities = 212/282 (75%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| |||||||||||||||||| | |||| | |||||||||||||||||| Sbjct 28669 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 28610 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||| |||| |||| ||| |||||| |||||||| | ||||| | Sbjct 28609 TCCTCCTAATATTTACGAATTTTACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATC 28550 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| |||||||| ||| ||| |||| |||| | |||||| | | ||| Sbjct 28549 TCTAGATTAACAGTTTTAAAAGCAATTCCAAGGTTAAGCCTCGGGATTTCACTTTTAACT 28490 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| |||||||||| |||||||| |||| |||||||| ||| || || Sbjct 28489 TATTAGTCAGCCTACGCGCCCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCG 28430 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||||||| | ||| ||| Sbjct 28429 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 28388 >seq1 Length=2798100 Score = 194 bits (214), Expect = 3e-47 Identities = 212/282 (75%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| |||||||||||||||||| | |||| | |||||||||||||||||| Sbjct 1539713 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 1539772 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||| |||| |||| ||| |||||| |||||||| | ||||| | Sbjct 1539773 TCCTCCTAATATTTACGAATTTTACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATC 1539832 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| |||||||| ||| ||| |||| |||| | |||||| | | ||| Sbjct 1539833 TCTAGATTAACAGTTTTAAAAGCAATTCCAAGGTTAAGCCTCGGGATTTCACTTTTAACT 1539892 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| |||||||||| |||||||| |||| |||||||| ||| || || Sbjct 1539893 TATTAGTCAGCCTACGCGCCCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCG 1539952 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||||||| | ||| ||| Sbjct 1539953 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 1539994 Score = 194 bits (214), Expect = 3e-47 Identities = 212/282 (75%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| |||||||||||||||||| | |||| | |||||||||||||||||| Sbjct 2431019 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 2430960 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||| |||| |||| ||| |||||| |||||||| | ||||| | Sbjct 2430959 TCCTCCTAATATTTACGAATTTTACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATC 2430900 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| |||||||| ||| ||| |||| |||| | |||||| | | ||| Sbjct 2430899 TCTAGATTAACAGTTTTAAAAGCAATTCCAAGGTTAAGCCTCGGGATTTCACTTTTAACT 2430840 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| |||||||||| |||||||| |||| |||||||| ||| || || Sbjct 2430839 TATTAGTCAGCCTACGCGCCCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCG 2430780 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||||||| | ||| ||| Sbjct 2430779 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 2430738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828783171216