Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-29 >seq1 Length=2798100 Score = 132 bits (146), Expect = 5e-29 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||| |||| Sbjct 1124777 GTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGACTTTCGTCCCTG 1124718 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || |||||||||||||| |||| | ||| || Sbjct 1124717 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTC 1124658 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 1124657 CGACCAGCCCTAGCTTACCTTCGCACGCCTCCGTTA 1124622 Score = 132 bits (146), Expect = 5e-29 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||| |||| Sbjct 2119885 GTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGACTTTCGTCCCTG 2119944 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || |||||||||||||| |||| | ||| || Sbjct 2119945 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTC 2120004 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 2120005 CGACCAGCCCTAGCTTACCTTCGCACGCCTCCGTTA 2120040 Score = 132 bits (146), Expect = 5e-29 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||| |||| Sbjct 2783986 GTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGACTTTCGTCCCTG 2784045 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || |||||||||||||| |||| | ||| || Sbjct 2784046 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTC 2784105 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 2784106 CGACCAGCCCTAGCTTACCTTCGCACGCCTCCGTTA 2784141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473590383552