Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq4 322 1e-85 seq1 322 1e-85 >seq4 Length=64497 Score = 322 bits (356), Expect = 1e-85 Identities = 318/411 (77%), Gaps = 14/411 (3%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||||||| || ||||||| |||| ||||||||| ||||||| Sbjct 28352 CTTTACAACCCAAAGGCCTTCTTCACTCATGCGGCATAGCTGGATCAGGCTTTCGCCCAT 28293 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 28292 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 28233 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||||| |||||| |||| | |||| ||| || ||||||| || Sbjct 28232 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTACC 28173 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||| |||||||| || | || ||||| |||| | | || | ||| | | | Sbjct 28172 AACAAGCTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTGG 28119 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | ||| ||| ||||||||| ||||||||| |||| || | | ||| Sbjct 28118 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 28067 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 || |||| | |||||||||||||||| |||||| | |||||||| | | Sbjct 28066 AGATTCCTATACATTACTCACCCGTCTGCCACTAAATTATACCGTAGCAAGCTACAATAT 28007 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 28006 AATTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 27956 >seq1 Length=2798100 Score = 322 bits (356), Expect = 1e-85 Identities = 318/411 (77%), Gaps = 14/411 (3%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||||||| || ||||||| |||| ||||||||| ||||||| Sbjct 1540030 CTTTACAACCCAAAGGCCTTCTTCACTCATGCGGCATAGCTGGATCAGGCTTTCGCCCAT 1540089 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1540090 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 1540149 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||||| |||||| |||| | |||| ||| || ||||||| || Sbjct 1540150 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTACC 1540209 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||| |||||||| || | || ||||| |||| | | || | ||| | | | Sbjct 1540210 AACAAGCTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTGG 1540263 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | ||| ||| ||||||||| ||||||||| |||| || | | ||| Sbjct 1540264 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 1540315 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 || |||| | |||||||||||||||| |||||| | |||||||| | | Sbjct 1540316 AGATTCCTATACATTACTCACCCGTCTGCCACTAAATTATACCGTAGCAAGCTACAATAT 1540375 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1540376 AATTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 1540426 Score = 322 bits (356), Expect = 1e-85 Identities = 318/411 (77%), Gaps = 14/411 (3%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||||||| || ||||||| |||| ||||||||| ||||||| Sbjct 2430702 CTTTACAACCCAAAGGCCTTCTTCACTCATGCGGCATAGCTGGATCAGGCTTTCGCCCAT 2430643 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2430642 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 2430583 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||||| |||||| |||| | |||| ||| || ||||||| || Sbjct 2430582 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTATTACCCTACC 2430523 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||| |||||||| || | || ||||| |||| | | || | ||| | | | Sbjct 2430522 AACAAGCTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTGG 2430469 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | ||| ||| ||||||||| ||||||||| |||| || | | ||| Sbjct 2430468 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 2430417 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 || |||| | |||||||||||||||| |||||| | |||||||| | | Sbjct 2430416 AGATTCCTATACATTACTCACCCGTCTGCCACTAAATTATACCGTAGCAAGCTACAATAT 2430357 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2430356 AATTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 2430306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222374378496