Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq4 370 3e-100 seq1 370 3e-100 >seq4 Length=64497 Score = 370 bits (410), Expect = 3e-100 Identities = 275/320 (86%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||||| ||||||| ||||| |||||||||||| | |||| |||| || ||||||| Sbjct 28161 GATTAGCTTGTTGGTAGGGTAATAGCTTACCAAGGCAATGATCTATAGCTGATCTGAGAG 28220 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 28221 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 28280 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | ||||| |||| || ||||||||| Sbjct 28281 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCTATGCCGCATGAGTGAAGAAGGCCTT 28340 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||| |||||||||| | |||||||||||||||||||| || |||| || || Sbjct 28341 TGGGTTGTAAAGCTCTTTTAGTGAGGAAGATAATGACGGTACTCACAGAAGAAGTCCTGG 28400 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| | Sbjct 28401 CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATTA-TT 28459 Query 467 GGGCGTAAAGGGTGCGTAGG 486 |||||||||||| ||||||| Sbjct 28460 GGGCGTAAAGGGCGCGTAGG 28479 >seq1 Length=2798100 Score = 370 bits (410), Expect = 3e-100 Identities = 275/320 (86%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||||| ||||||| ||||| |||||||||||| | |||| |||| || ||||||| Sbjct 1540221 GATTAGCTTGTTGGTAGGGTAATAGCTTACCAAGGCAATGATCTATAGCTGATCTGAGAG 1540162 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1540161 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 1540102 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | ||||| |||| || ||||||||| Sbjct 1540101 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCTATGCCGCATGAGTGAAGAAGGCCTT 1540042 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||| |||||||||| | |||||||||||||||||||| || |||| || || Sbjct 1540041 TGGGTTGTAAAGCTCTTTTAGTGAGGAAGATAATGACGGTACTCACAGAAGAAGTCCTGG 1539982 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| | Sbjct 1539981 CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATTA-TT 1539923 Query 467 GGGCGTAAAGGGTGCGTAGG 486 |||||||||||| ||||||| Sbjct 1539922 GGGCGTAAAGGGCGCGTAGG 1539903 Score = 370 bits (410), Expect = 3e-100 Identities = 275/320 (86%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||||| ||||||| ||||| |||||||||||| | |||| |||| || ||||||| Sbjct 2430511 GATTAGCTTGTTGGTAGGGTAATAGCTTACCAAGGCAATGATCTATAGCTGATCTGAGAG 2430570 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 2430571 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 2430630 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | ||||| |||| || ||||||||| Sbjct 2430631 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCTATGCCGCATGAGTGAAGAAGGCCTT 2430690 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||| |||||||||| | |||||||||||||||||||| || |||| || || Sbjct 2430691 TGGGTTGTAAAGCTCTTTTAGTGAGGAAGATAATGACGGTACTCACAGAAGAAGTCCTGG 2430750 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| | Sbjct 2430751 CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATTA-TT 2430809 Query 467 GGGCGTAAAGGGTGCGTAGG 486 |||||||||||| ||||||| Sbjct 2430810 GGGCGTAAAGGGCGCGTAGG 2430829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497568610304