Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq4 325 9e-87 seq1 325 9e-87 >seq4 Length=64497 Score = 325 bits (360), Expect = 9e-87 Identities = 273/333 (82%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 28388 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 28447 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||||| ||||||| | | ||||| | | |||||| | Sbjct 28448 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCCC 28507 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 |||| |||| || | ||||||| |||||| |||||| || | || || || Sbjct 28508 GAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAA--AGAGGATAG 28565 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||| Sbjct 28566 AGGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 28625 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 28626 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 28685 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 28686 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 28718 >seq1 Length=2798100 Score = 325 bits (360), Expect = 9e-87 Identities = 273/333 (82%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 1539994 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 1539935 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||||| ||||||| | | ||||| | | |||||| | Sbjct 1539934 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCCC 1539875 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 |||| |||| || | ||||||| |||||| |||||| || | |||| || Sbjct 1539874 GAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAAAGAGGAT--AG 1539817 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||| Sbjct 1539816 AGGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 1539757 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 1539756 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 1539697 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 1539696 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 1539664 Score = 325 bits (360), Expect = 9e-87 Identities = 273/333 (82%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 2430738 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 2430797 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||||| ||||||| | | ||||| | | |||||| | Sbjct 2430798 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCCC 2430857 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 |||| |||| || | ||||||| |||||| |||||| || | || || || Sbjct 2430858 GAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAA--AGAGGATAG 2430915 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||| Sbjct 2430916 AGGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 2430975 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 2430976 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 2431035 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 2431036 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 2431068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203174780928