Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1222 125 2e-26 seq1500 86.0 2e-14 >seq1222 Length=8912 Score = 125 bits (138), Expect = 2e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5959 CTAGAGAGTAGTTAGGGACAGTGGGAATCTTGTTAATCCATTCATGCGCGTCACTAATTA 6018 Query 413 GATGACGAGGCATTTGGCT 431 ||| ||||||||||||||| Sbjct 6019 GATAACGAGGCATTTGGCT 6037 Score = 86.0 bits (94), Expect = 2e-14 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| || |||||||||| ||| ||| ||| ||| |||| |||||||||||| Sbjct 5766 CTCCCAC--ATGCTACACCTCT---GTCTCTTCTCAATGTCAAACTATAGTCAAGCTCAA 5820 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGT 333 ||||||||||||||||||||| || || |||||| Sbjct 5821 CAGGGTCTTCTTTCCCCGCTGTGTCTCGCAGGCCCGT 5857 Score = 84.2 bits (92), Expect = 7e-14 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||| | ||| |||| ||||| ||||||||||||| Sbjct 5057 CTTTTGCTCTACGCGAGGTTTCTCTCCTCGCTGAGCTGTCCTTAACACACCTGCGTTATC 5116 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCG 122 ||| |||||||| |||| ||| |||||| || |||||| |||| || || || Sbjct 5117 TTTTGACAGATGTACCGCTTCAGTCAAACTATCCGCCTGACGCTGTCCTCGACTCG 5172 >seq1500 Length=7675 Score = 86.0 bits (94), Expect = 2e-14 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5691 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635165726208