Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1 295 2e-77 >seq1 Length=2798100 Score = 295 bits (326), Expect = 2e-77 Identities = 401/560 (72%), Gaps = 21/560 (4%) Strand=Plus/Minus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| || ||| | | |||||| || ||| Sbjct 1124712 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTCCGACC 1124653 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || | || ||||| | |||||||||||| |||| ||||| | | ||||||||| || Sbjct 1124652 AGCCCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGATCGCCCCAGTCAA 1124594 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 ||||||||||| || ||||| |||||| ||| || |||||||||| | | | Sbjct 1124593 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACATAGTTAGATATCAAAAATG 1124534 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| || |||||| | ||| ||||||| Sbjct 1124533 CAAAGGGTGGTATCTCAAGGTTGACTCCATTACAGCTAGCGCCATAACTTCAAAGTCTCC 1124474 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303 |||||||||| |||| | ||| |||| |||||||||| ||||| | |||| Sbjct 1124473 CACCTATCCTGCACATCACATTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 1124414 Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363 |||| |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 1124413 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAAT 1124354 Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423 || | ||||||| | | | |||||||||||||||||| ||||||||||||||||||| Sbjct 1124353 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 1124294 Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||||| || | ||||| ||||||||||||||||||||||| Sbjct 1124293 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAAT- 1124235 Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543 || | | | ||| |||| ||||||||||||||||||||| Sbjct 1124234 ---------GCAGAGCTTG---------CACCCTTCCTATTAACCTTCCAGCACCGGGCA 1124193 Query 544 GGCGTCAGTCCGTATACCTC 563 |||||||| || ||||| || Sbjct 1124192 GGCGTCAGACCCTATACTTC 1124173 Score = 295 bits (326), Expect = 2e-77 Identities = 401/560 (72%), Gaps = 21/560 (4%) Strand=Plus/Plus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| || ||| | | |||||| || ||| Sbjct 2119950 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTCCGACC 2120009 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || | || ||||| | |||||||||||| |||| ||||| | | ||||||||| || Sbjct 2120010 AGCCCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGATCGCCCCAGTCAA 2120068 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 ||||||||||| || ||||| |||||| ||| || |||||||||| | | | Sbjct 2120069 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACATAGTTAGATATCAAAAATG 2120128 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| || |||||| | ||| ||||||| Sbjct 2120129 CAAAGGGTGGTATCTCAAGGTTGACTCCATTACAGCTAGCGCCATAACTTCAAAGTCTCC 2120188 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303 |||||||||| |||| | ||| |||| |||||||||| ||||| | |||| Sbjct 2120189 CACCTATCCTGCACATCACATTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 2120248 Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363 |||| |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 2120249 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAAT 2120308 Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423 || | ||||||| | | | |||||||||||||||||| ||||||||||||||||||| Sbjct 2120309 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 2120368 Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||||| || | ||||| ||||||||||||||||||||||| Sbjct 2120369 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAAT- 2120427 Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543 || | | | ||| |||| ||||||||||||||||||||| Sbjct 2120428 ---------GCAGAGCTTG---------CACCCTTCCTATTAACCTTCCAGCACCGGGCA 2120469 Query 544 GGCGTCAGTCCGTATACCTC 563 |||||||| || ||||| || Sbjct 2120470 GGCGTCAGACCCTATACTTC 2120489 Score = 295 bits (326), Expect = 2e-77 Identities = 401/560 (72%), Gaps = 21/560 (4%) Strand=Plus/Plus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| || ||| | | |||||| || ||| Sbjct 2784051 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTCCGACC 2784110 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || | || ||||| | |||||||||||| |||| ||||| | | ||||||||| || Sbjct 2784111 AGCCCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGATCGCCCCAGTCAA 2784169 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 ||||||||||| || ||||| |||||| ||| || |||||||||| | | | Sbjct 2784170 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACATAGTTAGATATCAAAAATG 2784229 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| || |||||| | ||| ||||||| Sbjct 2784230 CAAAGGGTGGTATCTCAAGGTTGACTCCATTACAGCTAGCGCCATAACTTCAAAGTCTCC 2784289 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303 |||||||||| |||| | ||| |||| |||||||||| ||||| | |||| Sbjct 2784290 CACCTATCCTGCACATCACATTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 2784349 Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363 |||| |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 2784350 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAAT 2784409 Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423 || | ||||||| | | | |||||||||||||||||| ||||||||||||||||||| Sbjct 2784410 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 2784469 Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||||| || | ||||| ||||||||||||||||||||||| Sbjct 2784470 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAAT- 2784528 Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543 || | | | ||| |||| ||||||||||||||||||||| Sbjct 2784529 ---------GCAGAGCTTG---------CACCCTTCCTATTAACCTTCCAGCACCGGGCA 2784570 Query 544 GGCGTCAGTCCGTATACCTC 563 |||||||| || ||||| || Sbjct 2784571 GGCGTCAGACCCTATACTTC 2784590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702364317696