Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4 150 4e-34 seq1 150 4e-34 >seq4 Length=64497 Score = 150 bits (166), Expect = 4e-34 Identities = 154/200 (77%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || | | ||||| |||| || Sbjct 28360 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGGCATAGCTGGATCAGGCT 28302 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 28301 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 28242 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| ||||| || | |||||||||| | |||| ||| | | || ||| || | Sbjct 28241 GTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTAT 28182 Query 260 TACCCCGCCTACTACCTAAT 279 ||||| || || | ||||| Sbjct 28181 TACCCTACCAACAAGCTAAT 28162 >seq1 Length=2798100 Score = 150 bits (166), Expect = 4e-34 Identities = 154/200 (77%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || | | ||||| |||| || Sbjct 1540022 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGGCATAGCTGGATCAGGCT 1540080 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 1540081 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 1540140 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| ||||| || | |||||||||| | |||| ||| | | || ||| || | Sbjct 1540141 GTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTAT 1540200 Query 260 TACCCCGCCTACTACCTAAT 279 ||||| || || | ||||| Sbjct 1540201 TACCCTACCAACAAGCTAAT 1540220 Score = 150 bits (166), Expect = 4e-34 Identities = 154/200 (77%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || | | ||||| |||| || Sbjct 2430710 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGGCATAGCTGGATCAGGCT 2430652 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 2430651 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 2430592 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| ||||| || | |||||||||| | |||| ||| | | || ||| || | Sbjct 2430591 GTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCTAT 2430532 Query 260 TACCCCGCCTACTACCTAAT 279 ||||| || || | ||||| Sbjct 2430531 TACCCTACCAACAAGCTAAT 2430512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068777597952