Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq1 123 8e-24 >seq1 Length=2798100 Score = 123 bits (136), Expect = 8e-24 Identities = 258/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 ||||| ||||| || |||| ||||| | ||| ||| |||| | | ||||||||| Sbjct 611938 AAATATCCAATAATTTCTATAGAAGACGCAATGAGTGAAGACGATTATAAAGGTTGGAAA 611879 Query 2578 TCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACT 2637 | ||||||| | || || |||| ||||| ||||||| || || || || || || Sbjct 611878 TTACTTACTGTAAAGCTAGGAAATAAAATTCAACTGGTTGGGGATGATTTGTTTGTTACA 611819 Query 2638 AACACTGCTTACCTTGAA---AAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATC 2694 || || |||| | ||||| || | ||| | || || || | || || Sbjct 611818 AATTGTG---ACCTAATACGTAAAGGAATAGAGGAAAAAATGGCAAATTCTGTACTAATT 611762 Query 2695 AAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAA 2754 ||| || ||||| || || | || |||||||||| ||||| |||||||| ||| | Sbjct 611761 AAACCAAATCAAATAGGAACACTTACGGAAACTTTTGCTGCTATTGAAATGGCAAAATCA 611702 Query 2755 GCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCT 2814 ||| |||| || | | || ||||| ||||||||||| ||||| |||| || | Sbjct 611701 AATGGCTACAAGGCTATTATTTCTCACCGCTCAGGTGAAACAGAAGACACAACGATATCC 611642 Query 2815 GATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGAC 2874 | || ||||||||| | || ||| ||||| ||||| || || |||| || |||| Sbjct 611641 CACATAGCAGTTGCATCAAATTGTGGACAAATAAAGACTGGCTCCCTGTCGCGCTCTGAT 611582 Query 2875 CGTATTGCTAAATACAACCAATT 2897 | |||| || || || |||| Sbjct 611581 AGGCTTGCGAAGTATAATGAATT 611559 Score = 123 bits (136), Expect = 8e-24 Identities = 258/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Plus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 ||||| ||||| || |||| ||||| | ||| ||| |||| | | ||||||||| Sbjct 1830248 AAATATCCAATAATTTCTATAGAAGACGCAATGAGTGAAGACGATTATAAAGGTTGGAAA 1830307 Query 2578 TCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACT 2637 | ||||||| | || || |||| ||||| ||||||| || || || || || || Sbjct 1830308 TTACTTACTGTAAAGCTAGGAAATAAAATTCAACTGGTTGGGGATGATTTGTTTGTTACA 1830367 Query 2638 AACACTGCTTACCTTGAA---AAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATC 2694 || || |||| | ||||| || | ||| | || || || | || || Sbjct 1830368 AATTGTG---ACCTAATACGTAAAGGAATAGAGGAAAAAATGGCAAATTCTGTACTAATT 1830424 Query 2695 AAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAA 2754 ||| || ||||| || || | || |||||||||| ||||| |||||||| ||| | Sbjct 1830425 AAACCAAATCAAATAGGAACACTTACGGAAACTTTTGCTGCTATTGAAATGGCAAAATCA 1830484 Query 2755 GCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCT 2814 ||| |||| || | | || ||||| ||||||||||| ||||| |||| || | Sbjct 1830485 AATGGCTACAAGGCTATTATTTCTCACCGCTCAGGTGAAACAGAAGACACAACGATATCC 1830544 Query 2815 GATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGAC 2874 | || ||||||||| | || ||| ||||| ||||| || || |||| || |||| Sbjct 1830545 CACATAGCAGTTGCATCAAATTGTGGACAAATAAAGACTGGCTCCCTGTCGCGCTCTGAT 1830604 Query 2875 CGTATTGCTAAATACAACCAATT 2897 | |||| || || || |||| Sbjct 1830605 AGGCTTGCGAAGTATAATGAATT 1830627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156034516204224