Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq30 183 6e-44 >seq30 Length=102876 Score = 183 bits (202), Expect = 6e-44 Identities = 216/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 97140 TGCTCTTCATTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 97081 Query 100 AAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| || || |||||| | |||||||||||| ||||||||| | |||| Sbjct 97080 AAAGCAGGCTATTTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGT 97022 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||| | || ||||| | Sbjct 97021 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGAACAGATGGGGGCAT 96963 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 96962 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 96903 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||| ||||||| ||||||||||||| || Sbjct 96902 CATTTGCCAAAAATGTTTTCTTTAATCA-AGAACGAAAGTTAGAGG 96858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195222656