Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq486 89.7 2e-16 seq45 89.7 2e-16 seq30 89.7 2e-16 seq56 84.2 1e-14 seq42 77.0 1e-12 >seq486 Length=198290 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 6686 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 6627 Query 61 CCGAATCCC 69 | ||||||| Sbjct 6626 CTGAATCCC 6618 >seq45 Length=46566 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 153 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 212 Query 61 CCGAATCCC 69 | ||||||| Sbjct 213 CTGAATCCC 221 >seq30 Length=102876 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 94099 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 94040 Query 61 CCGAATCCC 69 | ||||||| Sbjct 94039 CTGAATCCC 94031 >seq56 Length=57696 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| || |||| ||||||| ||||||| || |||||||| Sbjct 12659 GGAAAAGAAACTAACCAGGATTTTCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 12718 Query 61 CCGAATCCC 69 | ||||||| Sbjct 12719 CTGAATCCC 12727 >seq42 Length=78728 Score = 77.0 bits (84), Expect = 1e-12 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 |||||||||||||||||||| || |||| ||||||| ||||||| || |||||||| | Sbjct 15917 AAAAGAAACTAACCAGGATTTTCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCACT 15858 Query 63 GAATCCC 69 |||||| Sbjct 15857 AAATCCC 15851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230398872480