Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq30 208 1e-51 seq486 201 2e-49 seq19 181 2e-43 seq84 163 5e-38 seq42 159 6e-37 seq157 105 1e-20 >seq30 Length=102876 Score = 208 bits (230), Expect = 1e-51 Identities = 217/292 (74%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96323 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 96382 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-------------CCA 118 | |||| || | |||| |||||| |||||||||||||| || Sbjct 96383 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 96440 Query 119 G----------CCACCAACCATAGTCGATGG----------------------GGCTATT 146 | | || ||| || || || | ||||| Sbjct 96441 GTAGTAAAAACCTCCCGACCGAAGCCGGGGGCCTTCGAGATACCGGAAAGTACGCCTATT 96500 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 96501 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 96560 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 96561 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 96612 Score = 199 bits (220), Expect = 6e-49 Identities = 218/292 (75%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 87347 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCACCCCAGACCTGTTATTG 87406 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| ||||||| |||||||||||||| Sbjct 87407 C-TCAATCT-CGTGCGGCTAGAAGCCACCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 87464 Query 116 ----------CCAGCC-ACC--AACCATAG----TCGAT-----GG-------GGCTATT 146 || || ||| |||| | |||| || | ||||| Sbjct 87465 GTAGTAAAAACCTCCCGACCGAAACCGGGGGCCTTCGAAATACCGGAAAGTACGCCTATT 87524 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 87525 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 87584 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct 87585 GAACGGCCGTGCACCACCACCCACTGAATCAAGAAAGAGCTCTCAATCTGTC 87636 >seq486 Length=198290 Score = 201 bits (222), Expect = 2e-49 Identities = 213/288 (74%), Gaps = 47/288 (16%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 14553 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 14611 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-------------CCAG--- 119 || || | |||| ||||| |||||||||||||| || | Sbjct 14612 AATCT-CGTGCGGCTAGAAGCAGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCGGTAG 14670 Query 120 -------CCACCAACCATAGTCGATGG----------------------GGCTATTTAGC 150 | || ||| || || || | ||||||||| Sbjct 14671 TAAAAACCTCCCGACCGAAGCCGGGGGCCTTCGAGATACCGGAAAGTACGCCTATTTAGC 14730 Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 ||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 14731 AGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAAC 14790 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 14791 GGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 14838 >seq19 Length=147286 Score = 181 bits (200), Expect = 2e-43 Identities = 210/292 (72%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103339 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 103280 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-------------CCA 118 | | || || |||| |||||| |||||||||||||| || Sbjct 103279 CTT--AATCTCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 103222 Query 119 G----------CCACCAACCATAGTCGATGG----------------------GGCTATT 146 | | || ||| || || || | ||||| Sbjct 103221 GTAGTGAAAACCTCCCGACCGAAGCCGGGGGCCTTTGAGATACCGGCAAGTACGCCTATT 103162 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 103161 TAGCAGGCTAGAGTCTTGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTGC 103102 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct 103101 GAACGGCCATGCGCCACCACCCGCCGAATCAAGAAAGAGCTCTCAATCTGTC 103050 >seq84 Length=41600 Score = 163 bits (180), Expect = 5e-38 Identities = 207/285 (73%), Gaps = 40/285 (14%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 21464 TCCTTGAGTGTAGCGCGCGTGCGGCTTAGAACATCTAAGGACATCACAGACCTGTTATTG 21523 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| ||| ||| ||||| |||||||||||||| Sbjct 21524 C-TCAATCTTGTGC-GGCCAGAAGCAGCCTGTCCCTCTAAGAAGATTTATTAGGTAGTGA 21581 Query 116 ---CCAGCC-ACCAA--CCATAGTC------GAT---GG-------GGCTATTTAGCAGG 153 || || ||| | ||| | | ||| || | |||||||||||| Sbjct 21582 AAACCTCCCGACCGAAGCCAGGGGCTTTCGAGATACCGGAAAATACGCCTATTTAGCAGG 21641 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 ||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||| Sbjct 21642 CAGGAGTCTCGTTCGTTATCGGAATTGACCAGACAAATCGCTCCACCTACTAAAAACGGC 21701 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| |||||||||| |||| |||||||||| Sbjct 21702 CATGCACCACCACCCACCAAATCAAGAAACAGCTCTCAATCTGTC 21746 >seq42 Length=78728 Score = 159 bits (176), Expect = 6e-37 Identities = 103/113 (91%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 41169 TTACCAGGCAAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCTACTA 41228 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 41229 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 41281 Score = 86.0 bits (94), Expect = 1e-14 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||| || |||| |||||||||||||||||| ||| Sbjct 40997 TCAGTGTAGCGCGCGTGCGGCCCAGAACGACTGAGGGTATCACAGACCTGTTATTG-CTC 41055 Query 76 AA 77 || Sbjct 41056 AA 41057 >seq157 Length=387809 Score = 105 bits (116), Expect = 1e-20 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 70498 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 70439 Query 72 C 72 | Sbjct 70438 C 70438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796795970682