Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq30 237 3e-60 seq486 223 7e-56 seq157 219 8e-55 seq19 206 5e-51 seq42 196 9e-48 seq84 192 1e-46 >seq30 Length=102876 Score = 237 bits (262), Expect = 3e-60 Identities = 211/258 (82%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 96424 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 96367 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || || | || Sbjct 96366 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGT-CTTCC 96308 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 96307 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 96250 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 96249 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 96190 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 96189 ACGTCCCTGCCCTTTGTA 96172 Score = 219 bits (242), Expect = 8e-55 Identities = 207/258 (80%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||| | ||||| || | ||||| |||||||||||||| | Sbjct 87448 CTTCTTAGAGGGACAGGTGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGGG 87391 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||||||||||||||||||||| || || || || | || Sbjct 87390 GTGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGT-CTTCT 87332 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 87331 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 87274 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 87273 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 87214 Query 311 ACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||| Sbjct 87213 ACGTCTCTGCCCTTTGTA 87196 >seq486 Length=198290 Score = 223 bits (246), Expect = 7e-56 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| || | ||||| |||||||||||||||| Sbjct 14650 CTTCTTAGAGGGACAGGCTGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 14593 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| | || || || | | Sbjct 14592 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGAAATCAGCGTGT-CTTTT 14534 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 14533 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 14476 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 14475 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 14416 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 14415 ACGTCCCTGCCCTTTGTA 14398 >seq157 Length=387809 Score = 219 bits (242), Expect = 8e-55 Identities = 179/215 (83%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 70438 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 70497 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || || || | || | |||||| |||| | |||||| | | || ||| ||||| Sbjct 70498 AATCAGCGTGT-CTTCCC--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTG 70554 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||| | | ||||||||||| | | | |||||||||| || |||||||||| ||| Sbjct 70555 CTAGGGATTGGGGCTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTC 70614 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| |||||||||||||||||||||||||||| Sbjct 70615 ATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 70649 >seq19 Length=147286 Score = 206 bits (228), Expect = 5e-51 Identities = 204/258 (79%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || || | ||||||||||||||||| Sbjct 103238 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGAGATT--AAGCAATAACAGGTCTGTG 103295 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || | || | Sbjct 103296 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTG-TCTT-- 103352 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || || |||||| ||||| | | ||| Sbjct 103353 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTGCTTCGTGCGAGGGATTGGGGCTTG 103412 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || ||||| |||| ||||| | | |||||||||| Sbjct 103413 CAATTATTCCCCATGAACGAGGAATTCCCAGTAACCGCGAGTCATTA-CTCGCGTTGATT 103471 Query 311 ACGTCCCTGCCCTTTGTA 328 ||||||||||||| |||| Sbjct 103472 ACGTCCCTGCCCTCTGTA 103489 >seq42 Length=78728 Score = 196 bits (216), Expect = 9e-48 Identities = 202/259 (78%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||| | |||||||| | ||| | ||||| || | ||||| |||||||||||||||| Sbjct 41094 CTTTTCAGAGGGACAGGCTGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 41037 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 || |||| || |||||||||||||||||||||||||||| ||| || || || | || Sbjct 41036 ATACCCTCAGTCGTTCTGGGCCGCACGCGCGCTACACTGAAAGAATCAGCGTGTGTTTTC 40977 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 | || || ||| | |||||| | | || ||| | ||||| ||||| ||| || Sbjct 40976 A----GGTCGAGAGGCCCGGGTAACCCGCTAAACCTCCTTTGTGCTAGGGATTGAGGCTT 40921 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| ||| | ||||| |||| || |||||||||| ||||| ||| ||||||||| Sbjct 40920 GCAATTATTCCTCATGAACGAAGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 40861 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 40860 TACGTCCCTGCCCTTTGTA 40842 >seq84 Length=41600 Score = 192 bits (212), Expect = 1e-46 Identities = 201/258 (78%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| ||| ||||| |||||||||||||||| Sbjct 21565 CTTCTTAGAGGGACAGGCTGCTTCTGGCCGCAC-AAGATTGAG-CAATAACAGGTCTGTG 21508 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||| ||||||||||||| ||||||||||||||||||| | || || | || | | Sbjct 21507 ATGTCCTTAGATGTTCTAAGCCGCACGCGCGCTACACTCAAGGAATCAGCTTGT-CTTTT 21449 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| | ||||| ||||| || ||| Sbjct 21448 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTTGTGCTAGGGATTAAGGCTTG 21391 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| | |||||||||| ||||| ||| |||||||||| Sbjct 21390 CAATTATTTCCCATGAACGAGGAATTCTCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 21331 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 21330 ACGTCCCTGCCCTTTGTA 21313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195055616