Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27]
2,836 sequences; 317,690,795 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 183 6e-44
seq51 109 1e-21
seq26 95.1 2e-17
>seq2670
Length=2080
Score = 183 bits (202), Expect = 6e-44
Identities = 216/286 (76%), Gaps = 10/286 (3%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| |
Sbjct 601 TGCTCTTTACTGAGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 660
Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155
||||||||| | | || |||||| |||||||||||| ||||||||| | ||||
Sbjct 661 AAAGCAGGCTATCCTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGT 719
Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212
|||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| |
Sbjct 720 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 778
Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272
||||| || ||||||||||||||||||| ||||| || |||||||
Sbjct 779 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 838
Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| || |||| |||||||||||||||| ||||||||||||| ||
Sbjct 839 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 883
>seq51
Length=1949485
Score = 109 bits (120), Expect = 1e-21
Identities = 187/263 (71%), Gaps = 19/263 (7%)
Strand=Plus/Plus
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||| | || ||||||||||| ||||||||||||| ||||||||| | || ||||||
Sbjct 1830176 GCCGGTACATTTACTTTGAACAAATTAGAGTGTTTAAAGCAGGCTATCGCCTGAATAC-- 1830233
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCTAGGAC-CGCC 182
|| ||||||||| || ||||| | ||||||||||||||||| |||| | | |
Sbjct 1830234 -TGCGTGGAATAATGGA--AGGACCT-CGGTTCTATTTTGTTGGTTTTCGAAATCTCAAG 1830289
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||||||||| | ||| | | ||||| | ||| |||||||||
Sbjct 1830290 ATAATGATTAATAGGGATTGATGGGAATATTCGTATTGCGACGATAGA---GAAATTCTT 1830346
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA------TTA 296
|||| ||||| || |||||||| || |||| ||||||||| ||
Sbjct 1830347 GGATCGTCGCAAGACGAATAGAAGCGAAAGCATTTGCCAAAAATGTTTTCAAGAAATGTA 1830406
Query 297 ATCAGTGAACGAAA-GTTAGGGG 318
|||| |||||||| ||||| ||
Sbjct 1830407 ATCA-AGAACGAAAGGTTAGAGG 1830428
>seq26
Length=4473850
Score = 95.1 bits (104), Expect = 2e-17
Identities = 182/258 (71%), Gaps = 34/258 (13%)
Strand=Plus/Minus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
|| ||||||||||| |||||||||| || ||||| || || |||||| ||||
Sbjct 1890070 ACGTTTACTTTGAACAAATTAGAGT----AACGCAGGTTATT-CT-GAATACT---GCAT 1890020
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC--GCCGTAATG 188
|||||| |||| | | |||||||||| ||||||| | | || | ||||||
Sbjct 1890019 GGAATA--------GGACCT-CAGTTCTATTTTATTGGTTTTTGGAACTCTGAAGTAATG 1889969
Query 189 A-TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGG------TGAAATTCT 241
| ||||||| ||||| || | | ||||| ||| ||||| |||||||||
Sbjct 1889968 AATTAATAGAGATAGATGGAAGCATTCGTATTGCGATGTTAGAGGAAAACGTGAAATTCT 1889909
Query 242 TGGATTTATTG-AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||| || | ||||| | |||||||| || |||| ||||||||||||||||
Sbjct 1889908 TGGATC-ATCGCAAGACAGAA----GCGAAAGCATTTGCCAAAAATGTTTTCATTAATCA 1889854
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||| ||
Sbjct 1889853 -AGAACGAAAGTTAGAGG 1889837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915174044928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |