Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27]
2,836 sequences; 317,690,795 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 214 3e-53
seq51 120 5e-25
seq26 116 6e-24
>seq2670
Length=2080
Score = 214 bits (236), Expect = 3e-53
Identities = 217/292 (74%), Gaps = 47/292 (16%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 1359
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117
| |||| || | |||| |||||| ||||||||||||||
Sbjct 1358 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 1301
Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146
| ||||| || || || || | |||||
Sbjct 1300 GTAGTAAAAACCCACCGGCCGAAGCCGGGGGCCTTCGCGATACCATAAGGTACGCCTATT 1241
Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206
||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1240 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 1181
Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1180 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 1129
>seq51
Length=1949485
Score = 120 bits (132), Expect = 5e-25
Identities = 97/116 (84%), Gaps = 10/116 (9%)
Strand=Plus/Minus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
||||||||||| || ||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1830780 TATTTAGCAGGCTAGAGTCTC--TCGTTATCGGAATTAACCAGACAAATCGCTCCACCAA 1830723
Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||| ||||||||| | ||| ||||||||||| ||| ||||||||||
Sbjct 1830722 CTAAGA------ATGCACCACTATCCACCGAATCAAGAAAAAGC--TCAATCTGTC 1830675
Score = 78.8 bits (86), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 11/108 (10%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAA--------CATCTAAGGGCATCACAGACCTGTT 67
|||||||||||||||||||| || || ||||||||||||||||||| |||||
Sbjct 1830951 TCAGTGTAGCGCGCGTGCGGTCCTAAAAAGGGCCGCATCTAAGGGCATCACAGA-CTGTT 1830893
Query 68 ATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
|||| ||||| | || |||| |||||| ||||||||||||||
Sbjct 1830892 ATTG-CTCAATC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 1830847
>seq26
Length=4473850
Score = 116 bits (128), Expect = 6e-24
Identities = 97/119 (82%), Gaps = 6/119 (5%)
Strand=Plus/Plus
Query 145 TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACT 204
||||||||| |||| ||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct 1889498 TTTAGCAGGCTAAGATCTCGTTCGTTATTGGAATTAATCAGACAAATCGCTCCACCAACA 1889557
Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCC 263
|||||| ||||||||| ||| |||||||||||||| ||| || |||| ||
Sbjct 1889558 AAGAAC------GCACCACCATCCACCAAATCAAGAAAGAGCAATCTGTCAATCCTTCC 1889610
Score = 75.2 bits (82), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||| |||| | ||||||||||||| ||||||||||||| ||||||
Sbjct 1889324 TCCTTCAGTGTAGCATGCGTACACTCCAGAACATCTAAAGGCATCACAGACC--TTATTG 1889381
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||| | || |||| ||||| ||||||||||||||
Sbjct 1889382 -CTCAATC-TCGTGCGGCTAGAAGCTGCCTGTCCCTCTAAGAAG 1889423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796778108916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |