Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq51 80.6 3e-13 seq2670 77.0 4e-12 >seq51 Length=1949485 Score = 80.6 bits (88), Expect = 3e-13 Identities = 80/101 (79%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||| || ||||||||| || |||||| |||| Sbjct 1830276 AAACCAACAAAATAGAACCG-AGGTCCT--TCCATTATTCCACGCA---GTATTCAGGCG 1830223 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||||| ||||||||||||| |||| ||||| || Sbjct 1830222 ATAGCCTGCTTTAAACACTCTAATTTGTTCAAAGTAAATGT 1830182 >seq2670 Length=2080 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| |||||| ||| Sbjct 735 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGCAGTATTCAGGC 677 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 676 GAGGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595183647624