Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2670 114 1e-23 seq51 80.6 3e-13 >seq2670 Length=2080 Score = 114 bits (126), Expect = 1e-23 Identities = 140/185 (76%), Gaps = 12/185 (6%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | ||||||||| | | || |||||| | | Sbjct 632 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATCCTCGCCTGAATAC--TGC 689 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 690 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 747 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| || ||||| | ||||| || | |||||||||||| Sbjct 748 GGTAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 807 Query 182 TGGAT 186 ||||| Sbjct 808 TGGAT 812 >seq51 Length=1949485 Score = 80.6 bits (88), Expect = 3e-13 Identities = 80/101 (79%), Gaps = 6/101 (6%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69 || ||||||||||| ||||||||| ||| ||||||||| | || |||||| | | Sbjct 1830182 ACATTTACTTTGAACAAATTAGAGTGTTTAAAGCAGGCTATCGCCTGAATAC---TGCGT 1830238 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| || ||||| | |||||||||||||| ||||| Sbjct 1830239 GGAATAATGGA--AGGACCT-CGGTTCTATTTTGTTGGTTT 1830276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511985933440