Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27]
2,836 sequences; 317,690,795 total letters
Query= AAMG01002034.1
Length=277
Score E
Sequences producing significant alignments: (Bits) Value
seq62 78.8 1e-12
seq42 78.8 1e-12
>seq62
Length=1311589
Score = 78.8 bits (86), Expect = 1e-12
Identities = 81/104 (78%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 24 TTATATTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACGGGTTTAGGTTTATAA 83
||||| |||| ||||| ||||| ||||| | ||| |||| | ||| ||||| |
Sbjct 43735 TTATAATTTTCTTTGTATGTTGATGCAAGTTTACAATTACGTACAGATTTCAGTTTACGA 43676
Query 84 TCAGTACTTAACGTAACGTAACACGTTACGGAGAAG-CTTGTGC 126
|||||| |||||||||||||||||||||| ||| | |||||||
Sbjct 43675 TCAGTATTTAACGTAACGTAACACGTTAC--AGATGTCTTGTGC 43634
>seq42
Length=2518118
Score = 78.8 bits (86), Expect = 1e-12
Identities = 73/93 (78%), Gaps = 6/93 (6%)
Strand=Plus/Plus
Query 29 TTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACG------GGTTTAGGTTTATA 82
|||||||||||||||||| | ||||| | ||| | |||| |||||||||||||
Sbjct 1288052 TTTTTGTTTGTGCGTTGATTAAAGTTTTAATTTTTATACGGGTTTAGGTTTAGGTTTATG 1288111
Query 83 ATCAGTACTTAACGTAACGTAACACGTTACGGA 115
|||| |||||||| ||| || | | ||||||||
Sbjct 1288112 ATCACTACTTAACATAATGTGATATGTTACGGA 1288144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787178372664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |