Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27]
2,836 sequences; 317,690,795 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 293 7e-77
seq26 260 4e-67
seq8 77.0 1e-11
>seq2670
Length=2080
Score = 293 bits (324), Expect = 7e-77
Identities = 237/283 (84%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||| ||||| | || | | ||| || ||||| ||||| | |||||||||
Sbjct 369 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 310
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 250
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 249 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 190
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||| |||||||| |||||| ||||||| || | |||||||
Sbjct 189 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 130
Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA 279
| ||| || |||||| | |||||||| || |||||||
Sbjct 129 GCTAAGACCGTGCGATCAGCACAAAGTTATTCAGAGTCACCAA 87
>seq26
Length=4473850
Score = 260 bits (288), Expect = 4e-67
Identities = 384/533 (72%), Gaps = 48/533 (9%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||||||||| ||||| | || | | ||| | |||| ||||| | |||||||||||
Sbjct 1890324 ACTCATTCCGATTACGGGTCCTCGGATGAGTTCCGTATTGTTATTTTTCGTCACTACCTC 1890383
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||||| ||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1890384 CCCGTGCCGGAAGTGACTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 1890443
Query 122 CTCAG--GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||| || |||||||||||| || ||| ||||| |||||||||| || ||| |
Sbjct 1890444 TTCAGATTTTCTCTCTCCGGAATCAAATCCTGATTCCTCGTTACCCGT---AACAATGAT 1890500
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
| || | | ||||||||| |||||||| ||| | || |||| || |||||| ||
Sbjct 1890501 AAGC--AGAACTTACCATCGACAGTTGATAAAGCAAATATCTGAAAGATGCATCGCTGGT 1890558
Query 240 TC-AAGGCCATGCGATTCGTTA---AGTTATTATGAATCACC---------AAGGAGCCC 286
| || | |||||| |||| ||||| | ||| | | | ||| |
Sbjct 1890559 GCTAAAATCGTGCGATCAGTTATTCAGTTACCA-AAATAAACGGTGGATGGATGGATAAC 1890617
Query 287 CGAAGG---GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTCGGG--- 336
|| | || | | |||| |||||||||| | | ||||| ||||||
Sbjct 1890618 CGTTCGCCATCGATTGATTTTGATCTAATAAAAGCGTCTCTTCCATCATTGGTCGGGACT 1890677
Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTA 393
| ||| ||||||||||||||||||||||| || |||||| | ||| || ||||| |
Sbjct 1890678 CTATTTTGCATGTATTAGCTCTAGAATTACTACAGTTATCTAAGTAAATGT-GGGTACAA 1890736
Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTT 451
| ||| ||| |||||||||| ||||| || |||||| | || ||| || |
Sbjct 1890737 CCTAATGAACCATAACTGATTAAATGA-------GCGGTTTCATTTTA---ATTCGGCAT 1890786
Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1890787 GCACTGAGACATGCATGGCTTAATCTTTGAGACAAGTATATGACTACTGGCAG 1890839
>seq8
Length=7313927
Score = 77.0 bits (84), Expect = 1e-11
Identities = 47/50 (94%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||| |||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 629196 ACTGAGACATACATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCA 629147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510357165056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |