Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_033055.1 Length=12513 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-13 >seq8 Length=7313927 Score = 86.0 bits (94), Expect = 5e-13 Identities = 129/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 8254 TTAAAATTATCAGAAACATGGATCTCCAAGAACTTATTTGAGTATGGTAAAGTAAGGTAT 8313 |||||||| || ||||||| || | || | | | ||| | || ||| |||| || Sbjct 3380413 TTAAAATTGTCTGAAACAT--ATTTTTAATCATCTTTGTGAATTCGGAAAAATAAGATAC 3380356 Query 8314 TATAAAGGTGAAGCAATTAGT-CAGACAACAAAGAAGATCTCAAGATTAATACCTGATAT 8372 | | | || |||||||||||| ||| | || |||||||| | ||| | || || ||||| Sbjct 3380355 TTTGATGGAGAAGCAATTAGTTCAG-CGACGAAGAAGATATACAGAATGATTCCAGATAT 3380297 Query 8373 TAATGATGGTATCAGCTCATTTATGTCCTCTCTCAGTACAATTAATACCATTACTGAGTC 8432 ||||||||| || ||||| | ||| ||| | || |||||||| |||||||| || Sbjct 3380296 TAATGATGGCATTTGCTCAATAATGATATCTTTATCAACTATTAATACAATTACTGAATC 3380237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39925126148208