Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1467 269 4e-70 seq686 219 6e-55 seq1525 91.5 2e-16 >seq1467 Length=10200 Score = 269 bits (298), Expect = 4e-70 Identities = 200/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2694 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2751 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| ||| |||||| ||||| | | ||| | |||||| Sbjct 2752 CTCGTTGAAGAGCAATAATTGCAATGCTCTGTCCCCAGCACGACGGAGTTTAACAAGATT 2811 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||||| || |||| || | | ||||||||||||||||||| Sbjct 2812 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 2869 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2870 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2918 >seq686 Length=657 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 392 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 449 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 450 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 509 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 510 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 566 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 567 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 623 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 624 AGCCGCCTGTCCCTCTAA 641 >seq1525 Length=581956 Score = 91.5 bits (100), Expect = 2e-16 Identities = 182/258 (71%), Gaps = 25/258 (10%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||| ||||| |||| ||||||| |||||||||| |||| ||||| | Sbjct 520038 GTACAAAGGTTAGGAACGTAATCAATGCGAGCTC-ATGACTCGCGTTTACAGAGAATT-C 520095 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | | ||||||||||| || |||| | ||||| | | |||| | || Sbjct 520096 CTCGTTCATGGAGAACAATTGCAAGCTTCAATCCGTAGCACGAAGGAGGTTCAGCGGGTT 520155 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||| ||| | | || | |||| | |||| | | Sbjct 520156 ACCCGGGCCTTTCGGCC-AGGGAACATACAC--TGAAGAAATCA----------CAGACT 520202 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 | ||| |||||||||||||||||| ||||||||| ||||| || |||| | ||| | Sbjct 520203 ACACAG---ATCTAAGGGCATCACAGA-CTGTTATTG-CTCAATCT--CGTGCGGCTAGA 520255 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 520256 AGCCGCCTGTCCCTCTAA 520273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751988708250