Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1467 361 9e-98 seq1525 129 9e-28 seq686 122 1e-25 seq743 100 5e-19 >seq1467 Length=10200 Score = 361 bits (400), Expect = 9e-98 Identities = 238/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2836 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2895 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 2896 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 2954 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 2955 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3013 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 3014 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 3073 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 3074 AAAGAGCTCTCAATCTGTC 3092 >seq1525 Length=581956 Score = 129 bits (142), Expect = 9e-28 Identities = 101/120 (84%), Gaps = 8/120 (7%) Strand=Plus/Plus Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 |||| | |||||||||| | || ||||| ||||||||||||||||||||||||||||| Sbjct 520337 GATGTGCCTATTTAGCACGCTAGAGTCTC--TCGTTATCGGAATTAACCAGACAAATCAC 520394 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||| ||||||||| | ||| ||||||||||| ||||||||||| Sbjct 520395 TCCACCAACTAAGA------ATGCACCACTATCCACCGAATCAAGAAAAAGCTATCAATC 520448 >seq686 Length=657 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 603 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| |||||||||||||| Sbjct 604 -CTCAATC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 645 >seq743 Length=788 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 CCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796788035550