Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1467 154 2e-35 seq743 77.0 4e-12 >seq1467 Length=10200 Score = 154 bits (170), Expect = 2e-35 Identities = 151/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 3965 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 4024 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| |||| |||||||||||| |||| | || Sbjct 4025 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 4084 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| |||| ||||| || ||| || | ||| | || |||| | ||| Sbjct 4085 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 4144 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 4145 GTGAGGCGGACC 4156 >seq743 Length=788 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| |||||| ||| Sbjct 454 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGCAGTATTCAGGC 512 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 513 GAGGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595191062700