Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1467 264 1e-68 seq743 114 1e-23 seq1525 93.3 4e-17 >seq1467 Length=10200 Score = 264 bits (292), Expect = 1e-68 Identities = 174/191 (91%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 4078 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 4019 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 4018 CATTAGCATGGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 3960 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 3959 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3900 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 3899 TTGGATTTATT 3889 >seq743 Length=788 Score = 114 bits (126), Expect = 1e-23 Identities = 140/185 (76%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | ||||||||| | | || |||||| | | Sbjct 557 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATCCTCGCCTGAATAC--TGC 500 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 499 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 442 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| || ||||| | ||||| || | |||||||||||| Sbjct 441 GGTAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 382 Query 182 TGGAT 186 ||||| Sbjct 381 TGGAT 377 >seq1525 Length=581956 Score = 93.3 bits (102), Expect = 4e-17 Identities = 133/180 (74%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC--C 67 || ||||||||||| ||||||||| ||| |||||||| || | |||| | | ||| | Sbjct 520948 ACATTTACTTTGAACAAATTAGAGTGTTTAAAGCAGG-CTATCCTCGCCT-GAATACTGC 520891 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAA 126 ||||||||| || ||||| | |||||||||||||| ||||| ||| | | ||| Sbjct 520890 GTGGAATAATGGA--AGGACCT-CGGTTCTATTTTGTTGGTTTTCGAAACCTCAAGATAA 520834 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| |||| |||| | ||| || | ||||| | | ||||||||||||||||| Sbjct 520833 TGATTAATAGGGATTGATGGGAGTATTCGTATTGCGACGATAGAGGTGAAATTCTTGGAT 520774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511992312000