Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25]
1,550 sequences; 291,257,934 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1467 264 1e-68
seq743 114 1e-23
seq1525 93.3 4e-17
>seq1467
Length=10200
Score = 264 bits (292), Expect = 1e-68
Identities = 174/191 (91%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 4078 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 4019
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 4018 CATTAGCATGGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 3960
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 3959 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3900
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 3899 TTGGATTTATT 3889
>seq743
Length=788
Score = 114 bits (126), Expect = 1e-23
Identities = 140/185 (76%), Gaps = 12/185 (6%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66
|| ||||||||||| ||||||||| | | ||||||||| | | || |||||| | |
Sbjct 557 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATCCTCGCCTGAATAC--TGC 500
Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121
||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | ||
Sbjct 499 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 442
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| ||| || ||||| | ||||| || | ||||||||||||
Sbjct 441 GGTAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 382
Query 182 TGGAT 186
|||||
Sbjct 381 TGGAT 377
>seq1525
Length=581956
Score = 93.3 bits (102), Expect = 4e-17
Identities = 133/180 (74%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC--C 67
|| ||||||||||| ||||||||| ||| |||||||| || | |||| | | ||| |
Sbjct 520948 ACATTTACTTTGAACAAATTAGAGTGTTTAAAGCAGG-CTATCCTCGCCT-GAATACTGC 520891
Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAA 126
||||||||| || ||||| | |||||||||||||| ||||| ||| | | |||
Sbjct 520890 GTGGAATAATGGA--AGGACCT-CGGTTCTATTTTGTTGGTTTTCGAAACCTCAAGATAA 520834
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|||| |||| |||| | ||| || | ||||| | | |||||||||||||||||
Sbjct 520833 TGATTAATAGGGATTGATGGGAGTATTCGTATTGCGACGATAGAGGTGAAATTCTTGGAT 520774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511992312000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |