Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= AAMG01002034.1 Length=277 Score E Sequences producing significant alignments: (Bits) Value seq1250 84.2 3e-14 seq1294 78.8 1e-12 >seq1250 Length=1373160 Score = 84.2 bits (92), Expect = 3e-14 Identities = 74/93 (80%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 29 TTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACGGGTTTAGG------TTTATA 82 |||||||||||||||||| | ||||| | ||| | |||||||||||| ||||| Sbjct 484639 TTTTTGTTTGTGCGTTGATTAAAGTTTTAATTTTTATACGGGTTTAGGTTTAGATTTATG 484580 Query 83 ATCAGTACTTAACGTAACGTAACACGTTACGGA 115 |||| |||||||||||| || | | |||||||| Sbjct 484579 ATCACTACTTAACGTAATGTGATATGTTACGGA 484547 >seq1294 Length=979139 Score = 78.8 bits (86), Expect = 1e-12 Identities = 81/104 (78%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 24 TTATATTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACGGGTTTAGGTTTATAA 83 ||||| |||| ||||| ||||| ||||| | ||| |||| | ||| ||||| | Sbjct 799482 TTATAATTTTCTTTGTATGTTGATGCAAGTTTACAATTACGTACAGATTTCAGTTTACGA 799541 Query 84 TCAGTACTTAACGTAACGTAACACGTTACGGAGAAG-CTTGTGC 126 |||||| |||||||||||||||||||||| ||| | ||||||| Sbjct 799542 TCAGTATTTAACGTAACGTAACACGTTAC--AGATGTCTTGTGC 799583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787188179700