Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1238 113 4e-20 >seq1238 Length=3292682 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| || || || ||||||||||| || |||||||| ||||||||| || | || | Sbjct 3273409 CATGTTTTAGCATTTTTTGCCGCTTCCGATGGTATCGTTAATGAGAATCTAATTGAGAGA 3273350 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || ||| || | || || || ||||||||||| ||||| || |||||||| Sbjct 3273349 TTCAGCCAAGAAGTGAAAATTTCCGAAGCACGTTGTTTCTATGGCTTTCAAATTGCCATA 3273290 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||| | || || |||||||| | | ||||| || || || || Sbjct 3273289 GAAAATATTCATTCTGAGATGTATTCTTTGCTCATTGAAACTTATAT 3273243 Score = 109 bits (120), Expect = 4e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || ||||| | || || ||| ||| || ||||||| || || Sbjct 3272205 TTATTTAATGCGATTGAGACACTTCCTTGTGTCAAGAAGAAGGCTAATTGGGCATTAAAC 3272146 Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||||| || | | || |||| ||| ||||| | | |||||||||| || || Sbjct 3272145 TGGATCAATCATGAGAGCG-CTACGTTTCCCGAACGTGTAGTCGCATTTGCGGCAGTTGA 3272087 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 |||| | || |||||||| || || || || |||||| | |||||||| ||| | || Sbjct 3272086 GGGTATCTTCTTCAGTGGCAGTTTCGCAGCCATTTTTTGGCTAAAGAAACGAGGAGTCAT 3272027 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||| ||||| ||||||||||| || | || ||||| ||||| Sbjct 3272026 GCCAGGTCTCACCTTCAGCAACGAACTTATCTCACGAGACGA 3271985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560489692000