Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_033055.1 Length=12513 Score E Sequences producing significant alignments: (Bits) Value seq1533 80.6 2e-11 >seq1533 Length=2891333 Score = 80.6 bits (88), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 8254 TTAAAATTATCAGAAACATGGATCTCCAAGAACTTATTTGAGTATGGTAAAGTAAGGTAT 8313 |||||||| || |||||| || | || | | | ||| | || ||| |||| || Sbjct 228092 TTAAAATTGTCTAAAACAT--ATTTTTAATCATCTTTGTGAATTCGGAAAAATAAGATAC 228149 Query 8314 TATAAAGGTGAAGCAATTAG-TCAGACAACAAAGAAGATCTCAAGATTAATACCTGATAT 8372 | | | || ||||||||||| |||| | || |||||||| | ||| | || || ||||| Sbjct 228150 TTTGATGGAGAAGCAATTAGTTCAG-CGACGAAGAAGATATACAGAATGATTCCAGATAT 228208 Query 8373 TAATGATGGTATCAGCTCATTTATGTCCTCTCTCAGTACAATTAATACCATTACTGAGTC 8432 ||||||||| || ||||| | ||| ||| | || |||||||| |||||||| || Sbjct 228209 TAATGATGGCATTTGCTCAATAATGATATCTTTATCAACTATTAATACAATTACTGAATC 228268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39925703783400