Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 352 2e-92
seq7155 307 8e-79
>seq7084
Length=1258986
Score = 352 bits (390), Expect = 2e-92
Identities = 565/805 (70%), Gaps = 10/805 (1%)
Strand=Plus/Plus
Query 66044 GGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTC 66103
|| || | ||| || ||||||||||| || | |||||| || || ||||| | ||||
Sbjct 2256 GGTGCCGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTC 2315
Query 66104 TGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCA 66163
|||||||||||||| ||||| || ||||| || |||| |||||| || |||||||||||
Sbjct 2316 TGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCC 2375
Query 66164 ACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CT 66222
||||| || ||||| ||| ||||||| |||| || | | | || | | |
Sbjct 2376 ACTTGCGATTCAATAATGCTAAACCAAAGACTTTGTGCTTTTATTTT-CTTATTGGCACG 2434
Query 66223 ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAG 66282
|||| |||| || | || | | |||||| ||||||||||||||| |
Sbjct 2435 TCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAA 2494
Query 66283 ACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCAT 66342
|| |||||||||||||||||||| |||||||| || |||| ||||||||| |||
Sbjct 2495 ACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCAT 2554
Query 66343 AAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC 66402
|||||||||||||||||| | ||| ||||| | ||| | || || ||||| || | ||
Sbjct 2555 AAATAGATCAGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACC 2614
Query 66403 -GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGA 66461
||| ||||| ||| || | || || || || || |||||||||||||| |||||||
Sbjct 2615 AGTG-TTTTTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGA 2673
Query 66462 TGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGA 66521
|||| || | ||| ||||| |||| ||||| || || ||||| || | ||| ||||
Sbjct 2674 TGGCAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGA 2733
Query 66522 AGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATC 66581
| || |||||||| || || | || || ||||||| ||| || || | || | | |
Sbjct 2734 ACACTCGCAACATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGC 2793
Query 66582 CTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAG 66641
|| ||| ||||| || || |||||||||||||| || || | || || || |
Sbjct 2794 CTTTTGCGCGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATG 2853
Query 66642 CACA---ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGA 66698
|||| || || ||| ||| || || |||||||| || || |||||||| |
Sbjct 2854 CACATTGATGTGCAGATGT---GAAAATACCATCAATGGAATCGTCCACCATGGTCAGTA 2910
Query 66699 GGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGT 66758
| ||||||| | ||| || | ||||| || | ||| || || || | ||| |
Sbjct 2911 GAAAGCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCAT 2970
Query 66759 GCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGC 66818
| ||||| ||| | || | | ||||| || ||||| | ||||| |||| |||||
Sbjct 2971 GTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGC 3030
Query 66819 CATGAATCCCGAGTGCACATCGCAT 66843
|||| || |||| ||| |||||
Sbjct 3031 CATGTATACCGATGGCAACACGCAT 3055
Score = 217 bits (240), Expect = 1e-51
Identities = 341/485 (70%), Gaps = 10/485 (2%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || || || || || ||||| ||||| | || || | | ||| |||||||| ||
Sbjct 1543 ATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGT 1602
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCGGCT 65195
|||||| || || ||| | |||||||| || || | ||| |||| ||| || ||||
Sbjct 1603 CTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAG-TAAGCTTGCCATAGTTGGGCT 1661
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| ||||| || || || ||||||||||||||||||||| | ||| |||||||||||||
Sbjct 1662 CAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCA 1721
Query 65256 TGTCAATGATACGACGT----CCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC 65311
| | ||| ||| || | || |||||||| || || ||||| || ||||
Sbjct 1722 TTTTAAT----CGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATG 1777
Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371
| ||| || ||||| | || | || || |||| | ||||| ||| |
Sbjct 1778 TGCTGTGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTC 1837
Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431
|| || |||||||||||| ||| | |||| | | ||||||| |||| | |||
Sbjct 1838 ATATCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACT 1897
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
|| || || || || || |||||||| ||| || || || ||| |||||||| ||
Sbjct 1898 TGAAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGAC 1957
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
||| ||||||| | |||||| ||||| || |||||||||||||| || | || ||| |||
Sbjct 1958 TCATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAG 2017
Query 65552 TTTCG 65556
|| ||
Sbjct 2018 TTGCG 2022
>seq7155
Length=3116674
Score = 307 bits (340), Expect = 8e-79
Identities = 505/725 (70%), Gaps = 5/725 (1%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| ||||| || |||||||| || ||||| || ||| | || ||||| ||| |||| |
Sbjct 2759294 AGGCAGAAGCATCGTTCTGGACAGTAGAGGAAGTAGATCTTTCTAAAGATATGGATGATT 2759235
Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225
||| ||| | | ||||| |||||| ||| ||| ||||| || || || ||||
Sbjct 2759234 GGGCACGTCTCACTGATAATGAACGACATTTTATTTCACACGTGTTAGCCTTTTTCGCCG 2759175
Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285
| || || ||||| || ||||| ||| || | ||||||||| ||||| || ||||||
Sbjct 2759174 CATCTGATGGTATTGTGAATGAAAATGTAGTTGAACGTTTCTGCCAGGAAGTCCAAGTGA 2759115
Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345
| ||||| ||||| ||||| || || || ||||| ||||||||||| || || || ||||
Sbjct 2759114 CAGAGGCACGTTGCTTCTATGGATTTCAAATTGCGATGGAGAATGTGCATTCTGAAATGT 2759055
Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAAT 61404
| || | | || ||||| || || | ||| | || | ||| | || ||||||
Sbjct 2759054 ATAGCATATTAATTGATACATATATTAAGGACTCGAAACAAAG-GAATTACTTATTCAAT 2758996
Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464
|| || ||||| || || || || ||||| || || |||||||| | |||||| ||
Sbjct 2758995 GCTATAGAGACAATGCCTGCCGTAAAGCGCAAGGCAGATTGGGCGCTTGCTTGGATTTCC 2758936
Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524
| | || | ||||||||||| | | |||||||| | || || ||| | ||
Sbjct 2758935 TCGAAGTCAGCCAACTTTGGTGAACGTGTAATTGCATTTGCTGCCGTTGAAGGTATCTTC 2758876
Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584
|||||||| ||||| | ||||| ||| | ||||||||||| | ||||| || ||
Sbjct 2758875 TTCAGTGGCAGTTTTGCTTCGATCTTCTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTG 2758816
Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644
|| || |||||| | || ||||| || ||||| | |||||||| || || ||||
Sbjct 2758815 ACATTTTCCAATGAACTAATTTCACGAGATGAGGGACTTCATTGTGACTTCGCATGTTTG 2758756
Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704
| ||| ||| || | | | || | |||||| | | ||| || || |
Sbjct 2758755 ATGTTCCAAC---ATTTAATACAAAAACCAAGTAATGAGCGTATTGTTGAAATAATTTCT 2758699
Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764
|| || || | || || |||||||| | |||||||||||||| || | |||||
Sbjct 2758698 GAAGCTGTTAAAATTGAGCAGGAATTCTTAACTGACGCTTTGCCGGTGAATTTAATCGGT 2758639
Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT 61824
|||||||| ||||||||| | ||||| |||||||| || || ||| || | |||||
Sbjct 2758638 ATGAATTGCAAACTAATGTCCGATTATATCGAATTTGTGGCTGATCGTTTGCTTGTCGAG 2758579
Query 61825 TTGGG 61829
||||
Sbjct 2758578 CTGGG 2758574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397533278150240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |