Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7084 352 2e-92 seq7155 307 8e-79 >seq7084 Length=1258986 Score = 352 bits (390), Expect = 2e-92 Identities = 565/805 (70%), Gaps = 10/805 (1%) Strand=Plus/Plus Query 66044 GGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTC 66103 || || | ||| || ||||||||||| || | |||||| || || ||||| | |||| Sbjct 2256 GGTGCCGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTC 2315 Query 66104 TGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCA 66163 |||||||||||||| ||||| || ||||| || |||| |||||| || ||||||||||| Sbjct 2316 TGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCC 2375 Query 66164 ACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CT 66222 ||||| || ||||| ||| ||||||| |||| || | | | || | | | Sbjct 2376 ACTTGCGATTCAATAATGCTAAACCAAAGACTTTGTGCTTTTATTTT-CTTATTGGCACG 2434 Query 66223 ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAG 66282 |||| |||| || | || | | |||||| ||||||||||||||| | Sbjct 2435 TCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAA 2494 Query 66283 ACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCAT 66342 || |||||||||||||||||||| |||||||| || |||| ||||||||| ||| Sbjct 2495 ACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCAT 2554 Query 66343 AAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC 66402 |||||||||||||||||| | ||| ||||| | ||| | || || ||||| || | || Sbjct 2555 AAATAGATCAGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACC 2614 Query 66403 -GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGA 66461 ||| ||||| ||| || | || || || || || |||||||||||||| ||||||| Sbjct 2615 AGTG-TTTTTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGA 2673 Query 66462 TGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGA 66521 |||| || | ||| ||||| |||| ||||| || || ||||| || | ||| |||| Sbjct 2674 TGGCAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGA 2733 Query 66522 AGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATC 66581 | || |||||||| || || | || || ||||||| ||| || || | || | | | Sbjct 2734 ACACTCGCAACATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGC 2793 Query 66582 CTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAG 66641 || ||| ||||| || || |||||||||||||| || || | || || || | Sbjct 2794 CTTTTGCGCGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATG 2853 Query 66642 CACA---ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGA 66698 |||| || || ||| ||| || || |||||||| || || |||||||| | Sbjct 2854 CACATTGATGTGCAGATGT---GAAAATACCATCAATGGAATCGTCCACCATGGTCAGTA 2910 Query 66699 GGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGT 66758 | ||||||| | ||| || | ||||| || | ||| || || || | ||| | Sbjct 2911 GAAAGCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCAT 2970 Query 66759 GCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGC 66818 | ||||| ||| | || | | ||||| || ||||| | ||||| |||| ||||| Sbjct 2971 GTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGC 3030 Query 66819 CATGAATCCCGAGTGCACATCGCAT 66843 |||| || |||| ||| ||||| Sbjct 3031 CATGTATACCGATGGCAACACGCAT 3055 Score = 217 bits (240), Expect = 1e-51 Identities = 341/485 (70%), Gaps = 10/485 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| ||||| | || || | | ||| |||||||| || Sbjct 1543 ATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGT 1602 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCGGCT 65195 |||||| || || ||| | |||||||| || || | ||| |||| ||| || |||| Sbjct 1603 CTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAG-TAAGCTTGCCATAGTTGGGCT 1661 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | ||||| || || || ||||||||||||||||||||| | ||| ||||||||||||| Sbjct 1662 CAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCA 1721 Query 65256 TGTCAATGATACGACGT----CCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC 65311 | | ||| ||| || | || |||||||| || || ||||| || |||| Sbjct 1722 TTTTAAT----CGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATG 1777 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 | ||| || ||||| | || | || || |||| | ||||| ||| | Sbjct 1778 TGCTGTGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTC 1837 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || || |||||||||||| ||| | |||| | | ||||||| |||| | ||| Sbjct 1838 ATATCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACT 1897 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 || || || || || || |||||||| ||| || || || ||| |||||||| || Sbjct 1898 TGAAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGAC 1957 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 ||| ||||||| | |||||| ||||| || |||||||||||||| || | || ||| ||| Sbjct 1958 TCATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAG 2017 Query 65552 TTTCG 65556 || || Sbjct 2018 TTGCG 2022 >seq7155 Length=3116674 Score = 307 bits (340), Expect = 8e-79 Identities = 505/725 (70%), Gaps = 5/725 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || |||||||| || ||||| || ||| | || ||||| ||| |||| | Sbjct 2759294 AGGCAGAAGCATCGTTCTGGACAGTAGAGGAAGTAGATCTTTCTAAAGATATGGATGATT 2759235 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 ||| ||| | | ||||| |||||| ||| ||| ||||| || || || |||| Sbjct 2759234 GGGCACGTCTCACTGATAATGAACGACATTTTATTTCACACGTGTTAGCCTTTTTCGCCG 2759175 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || ||||| || ||||| ||| || | ||||||||| ||||| || |||||| Sbjct 2759174 CATCTGATGGTATTGTGAATGAAAATGTAGTTGAACGTTTCTGCCAGGAAGTCCAAGTGA 2759115 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||| ||||| ||||| || || || ||||| ||||||||||| || || || |||| Sbjct 2759114 CAGAGGCACGTTGCTTCTATGGATTTCAAATTGCGATGGAGAATGTGCATTCTGAAATGT 2759055 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAAT 61404 | || | | || ||||| || || | ||| | || | ||| | || |||||| Sbjct 2759054 ATAGCATATTAATTGATACATATATTAAGGACTCGAAACAAAG-GAATTACTTATTCAAT 2758996 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 || || ||||| || || || || ||||| || || |||||||| | |||||| || Sbjct 2758995 GCTATAGAGACAATGCCTGCCGTAAAGCGCAAGGCAGATTGGGCGCTTGCTTGGATTTCC 2758936 Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 | | || | ||||||||||| | | |||||||| | || || ||| | || Sbjct 2758935 TCGAAGTCAGCCAACTTTGGTGAACGTGTAATTGCATTTGCTGCCGTTGAAGGTATCTTC 2758876 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 |||||||| ||||| | ||||| ||| | ||||||||||| | ||||| || || Sbjct 2758875 TTCAGTGGCAGTTTTGCTTCGATCTTCTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTG 2758816 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 || || |||||| | || ||||| || ||||| | |||||||| || || |||| Sbjct 2758815 ACATTTTCCAATGAACTAATTTCACGAGATGAGGGACTTCATTGTGACTTCGCATGTTTG 2758756 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704 | ||| ||| || | | | || | |||||| | | ||| || || | Sbjct 2758755 ATGTTCCAAC---ATTTAATACAAAAACCAAGTAATGAGCGTATTGTTGAAATAATTTCT 2758699 Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764 || || || | || || |||||||| | |||||||||||||| || | ||||| Sbjct 2758698 GAAGCTGTTAAAATTGAGCAGGAATTCTTAACTGACGCTTTGCCGGTGAATTTAATCGGT 2758639 Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT 61824 |||||||| ||||||||| | ||||| |||||||| || || ||| || | ||||| Sbjct 2758638 ATGAATTGCAAACTAATGTCCGATTATATCGAATTTGTGGCTGATCGTTTGCTTGTCGAG 2758579 Query 61825 TTGGG 61829 |||| Sbjct 2758578 CTGGG 2758574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397533278150240