Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2730 102 3e-19 seq1113 93.3 2e-16 seq581 91.5 6e-16 >seq2730 Length=193388 Score = 102 bits (112), Expect = 3e-19 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||| | ||| ||| ||||| ||| |||||| ||| |||| | || | Sbjct 92024 AGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAAGACCGAAA 91965 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||||| ||||||||||||| |||| | ||| |||||||||||| Sbjct 91964 CAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTATAGGGGCGA 91919 >seq1113 Length=4665328 Score = 93.3 bits (102), Expect = 2e-16 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||||||| ||| |||| ||||| || | Sbjct 3004139 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATATTTGATTAGGTTGAAGTAAGGG 3004080 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 ||||| | ||| | ||| | | |||||| ||||||||||||| |||| | ||| Sbjct 3004079 GAAACCCCAATGGCAGATCGAAACAGTTCTGACGTGCAAATCGATAGTCATAATTG 3004024 >seq581 Length=806958 Score = 91.5 bits (100), Expect = 6e-16 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 71 TGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGA 130 |||| |||||| | | | |||| |||||||| | || |||||||| ||||||| Sbjct 756028 TGGGTGGTAAACTCCATMTAAAACTAAATATAACCATGASACCGATAGTAAACAAGTACC 756087 Query 131 GTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAA 190 |||| ||||| ||||||| |||||| | ||||||||||| || | |||||| || | | Sbjct 756088 GTGAGGGAAAGTTGAAAAGAACTTTGAATAGAGAGTTAAATAGTATGTGAAACTGCTTAG 756147 Query 191 AGG 193 ||| Sbjct 756148 AGG 756150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079929086300