Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2845 89.7 2e-15 >seq2845 Length=126085 Score = 89.7 bits (98), Expect = 2e-15 Identities = 144/203 (71%), Gaps = 23/203 (11%) Strand=Plus/Minus Query 308 CTAATAAATACACCCCTTCCGAA--GTCGGGGTTT--TTAGCATGTATTAGCTCTAGAAT 363 |||||||| ||| | |||| || ||| | |||| || |||| ||||||||||||||| Sbjct 73130 CTAATAAAAGCACACGTTCCAAAAGGTCCGTGTTTATTTTGCATATATTAGCTCTAGAAT 73071 Query 364 TACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACGATAACTGATTTAATGAG 421 |||||| |||||| | ||| | || || ||| | || ||||| || | | ||| Sbjct 73070 TACCACAGTTATCAAAGTA--ACTGTTAACGATCTATGGAAACATAAC-CATATCACGAG 73014 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 || || || |||||| | | || ||| || |||||| ||||| |||| Sbjct 73013 CCTTTTGCGGTTTCA-TTTTTAATTTGTTTGTACTTACACATG-------------TTGA 72968 Query 482 GACAAGCATATGACTACTGGCAG 504 ||||||||||| ||||||||||| Sbjct 72967 GACAAGCATATAACTACTGGCAG 72945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510350066176