Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3107 553 1e-152 seq2718 297 2e-75 >seq3107 Length=1323484 Score = 553 bits (612), Expect = 1e-152 Identities = 1199/1780 (67%), Gaps = 47/1780 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| ||||| | || || | | ||| |||||||| || Sbjct 934420 ATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGT 934479 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 |||||| || || ||| | ||||||| || || | | || |||| || ||||| Sbjct 934480 CTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTACCATAGTTGGGCTC 934539 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||||| || || || ||||||||||| ||||||||| | ||| |||||||||||||| Sbjct 934540 AGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCCAT 934599 Query 65257 GTCAAT-GATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 | || ||| | || || | |||||||| || || ||||| || |||| | Sbjct 934600 TTTGATTGAT--GTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 934657 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||| || ||||| | || | || || |||| | ||||| ||| ||| Sbjct 934658 TGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCATA 934717 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || |||||||||||| ||| | |||| | | ||||||| |||| | ||||| Sbjct 934718 TCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTTGA 934777 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || || || |||||||| ||| || ||||| ||| |||||||| || ||| Sbjct 934778 AATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACTCA 934837 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||| | |||||| || || || |||||||||||||| || | || || ||||| Sbjct 934838 TTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGTTG 934897 Query 65555 CGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTT 65610 || | || ||| ||| || || | ||||||| ||| ||||| | || ||| Sbjct 934898 CGGACACCATGTTGCTTT--ATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTG 934955 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | ||| ||||| || | || || | || |||| | |||||||| Sbjct 934956 GTGTTTTA--TCC------CACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACC 935007 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 | || | || || || | | ||| | || || || | || | ||| | Sbjct 935008 TTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCTAATTCGCAACTAGCTTCCAAGGCGCC 935067 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCATCGCTCTCGTAC 65788 | | ||||| || ||||| || | |||| || | | ||| || || || ||||| Sbjct 935068 ATAGTAAATTGTTTCGAATATTTGCTGATTCAAAAGTAA--TGCTTCTTCACTTTCGTAT 935125 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 || || ||| | | |||| ||| || | ||| || ||||||||||||||||||||| Sbjct 935126 GGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGGACGA 935185 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 || | ||||| || || ||||| |||| || || | ||| || || || || | Sbjct 935186 TGTCTGAAATTCGATTTCCTTGCCTCCGGTAAGGGATAATGATTAATGTCTATTATTTTA 935245 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||||||| ||||| || | || | | | | || || | ||| Sbjct 935246 TTCAAATTACGTGTAACGGTTTTGGTGACCTCTTTGAGGCGCTTAAAGTCGTACGTTTTT 935305 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 ||||| ||| |||||| | | || | || || | |||||| Sbjct 935306 ------TCGGGTGTG---------ACAAACATATTCAACGCGATTGAAGCCAAGTTGCAC 935350 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 ||||||| ||| ||||| || | ||| || ||||||||||| || | |||||| || Sbjct 935351 ACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACATAAATTACTACACTTA 935410 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || || | |||||||||||||||||| ||||| || ||||| || |||| |||||| Sbjct 935411 ATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTAT 935470 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || ||||||||||| ||||| || ||||| ||| ||||||| |||| || || Sbjct 935471 GGTGTGCCGGTCTCCACTTGCGATTCAATAATGCTAAACCAAAGACTTTGTGCTTTTACT 935530 Query 66209 GTACGTACC-GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 | | || || | |||| |||| || | || | | |||||| |||||| Sbjct 935531 TT-CTTATTAGCACGTCCTTCCTGTTCATATTTCAGATATAATTTTTCGAACTCTTCACC 935589 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||||||||| |||| |||||||||||||||||||| |||||||| || ||| Sbjct 935590 CCATACTTCATGTAGACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATTGGC 935649 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||||||||| ||||||||||||||||||||| | || || || | ||| | || || Sbjct 935650 TTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCG 935709 Query 66388 TTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 ||||| || | || ||| ||||| ||| || | || | || || || ||||||| Sbjct 935710 ATGCTCTTCTTTCCCAGTG-TTTTTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCC 935768 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 ||||||||||||||||||| || | ||| |||||| ||||||||||| || || |||| Sbjct 935769 ATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATCCACATAGC 935828 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | || ||||| ||||| || |||||||| || || | ||||| ||| ||||||| || | Sbjct 935829 GTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGTGCCATTTGTAC 935888 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 | | || | | ||| ||| ||||| || || |||||||||||||| || || | Sbjct 935889 CCGCAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCCCCAGCAG 935948 Query 66627 TCTTCGAGATGGCAGCACA---ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 || || || ||||| || ||| ||| ||| || || |||||||| || Sbjct 935949 ATTTGGAAATCAATGCACATTGATGTGCCGATGT---GAAAATCCCATCAATGGAATCGT 936005 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 || |||||||| || ||||||| | ||| || | ||||| || | ||| | Sbjct 936006 CCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTGGTGGCAGCAGCGAATA 936065 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 | || || | ||| |||||||| ||| | || | | ||||| || ||||| | | Sbjct 936066 GCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTTGTATGTTTCGATTGCTG 936125 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCAT 66843 |||| |||| ||||||||| || |||| ||| ||||| Sbjct 936126 CATCTATGTCTTCGCCATGTATACCGATGGCAACACGCAT 936165 >seq2718 Length=1670031 Score = 297 bits (328), Expect = 2e-75 Identities = 497/718 (69%), Gaps = 3/718 (0%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || |||||||| || ||||| || ||| | || ||||| ||| |||| | Sbjct 70788 AGGCAGAAGCATCGTTCTGGACAGTAGAGGAAGTAGATCTTTCTAAAGATATGGATGATT 70847 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 ||| || | | ||||| |||||| ||| || ||||| || || || |||| Sbjct 70848 GGGCACGCCTCACTGATAATGAACGACATTTTATTTCCCACGTGTTAGCCTTTTTCGCCG 70907 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || ||||| || ||||| ||| || | ||||| ||| ||||| || |||||| Sbjct 70908 CATCTGATGGTATTGTGAATGAAAATGTAGTTGAACGCTTCTGCCAGGAAGTCCAAGTGA 70967 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||| ||||| ||||| || || || ||||| ||||||||||| || || || |||| Sbjct 70968 CAGAGGCACGTTGCTTCTATGGATTTCAAATTGCGATGGAGAATGTGCATTCTGAAATGT 71027 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 | || | | || ||||| || || | ||| | || | | | || ||||||| Sbjct 71028 ATAGCATATTAATTGATACATATATTAAGGACTCGAAACAAAGGAATTGCTTATTCAATG 71087 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | || ||||| || || || || ||||| || || |||||||| | |||||| | Sbjct 71088 CTATAGAGACAATGCCTGCCGTAAAGCGTAAGGCAGATTGGGCGCTTGCTTGGATTTCTT 71147 Query 61466 GTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 | |||| | ||||||||||| | | |||||||| | || || ||| | || | Sbjct 71148 CGAAGTCGGCCAACTTTGGTGAACGTGTAATTGCATTTGCTGCCGTTGAAGGTATTTTCT 71207 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 ||||||| ||||| | ||||| ||| | ||||||||||| | ||||| || ||| Sbjct 71208 TCAGTGGCAGTTTTGCTTCGATCTTCTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTGA 71267 Query 61586 CCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGC 61645 | || |||||| | || ||||| || ||||| | |||||||| || || |||| Sbjct 71268 CATTTTCCAATGAACTAATTTCACGAGATGAGGGACTTCATTGTGACTTCGCATGTTTGA 71327 Query 61646 TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTG 61705 | ||| ||| || | | | || | |||||| | | ||| || || || Sbjct 71328 TGTTCCAAC---ATTTAATACAAAAACCAAGTAATGAGCGTATTGTTGAAATAATTTCTG 71384 Query 61706 AGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCA 61765 | || || | || || |||||||| | |||||||||||||| || || ||||| | Sbjct 71385 AAGCTGTTAAAATTGAGCAGGAATTCTTAACTGACGCTTTGCCGGTGAATCTAATCGGTA 71444 Query 61766 TGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||| ||||||||| | ||||| |||||||| || || ||| || | ||||| Sbjct 71445 TGAATTGCAAACTAATGTCCGATTATATCGAATTTGTGGCTGATCGTTTGCTTGTCGA 71502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397551981239840