Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028484.1
Length=11343
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 138 8e-29
>seq2708
Length=213413
Score = 138 bits (152), Expect = 8e-29
Identities = 241/348 (69%), Gaps = 2/348 (1%)
Strand=Plus/Minus
Query 6583 GCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGCGCCTT 6642
|| || ||| | ||| | ||| | |||| |||| |||||| | ||| |||| ||
Sbjct 50362 GCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATT 50303
Query 6643 CGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTATTCAAA 6702
|| ||||||||||| | |||||||| | |||||| | || | | ||| | |||||
Sbjct 50302 CGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAG 50243
Query 6703 GGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACACAAGT 6762
|| |||| |||| ||||||| ||| || |||| || |||||| ||| | | |
Sbjct 50242 GGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCT 50183
Query 6763 GGACAAGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTACGAAAAG 6822
|||||||||||| |||||| | | | || |||||||||| | || ||||| ||
Sbjct 50182 GGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAA 50123
Query 6823 TGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGACAATTT 6882
||||| ||| || || | || ||||||| || || ||| |||| || || |||||
Sbjct 50122 TGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTC 50063
Query 6883 TTTGGTCTA-CCGAACTTATTTGTGCGAACGCATGAATTCTTTGAAAA 6929
|||| ||| || ||||| | || || ||||| | ||||||||
Sbjct 50062 CTTGG-CTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAA 50016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36181054286088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |