Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq2708 152 4e-33 >seq2708 Length=213413 Score = 152 bits (168), Expect = 4e-33 Identities = 242/347 (70%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 8227 ATAGGTCGATTCTTCGCTCTTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAA 8286 ||||| |||| || || | ||||| ||| || | |||| ||||| || || || ||| Sbjct 50338 ATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAA 50279 Query 8287 TATTTAATTAAATTACATTTCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA 8346 || | || || || ||||| || || | ||| || | ||| |||| ||||||||| Sbjct 50278 TACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTA 50219 Query 8347 AACACAGTTGTTaaaaaaaTGCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGAC 8406 | |||||| | ||||||| | || | || ||||||||| | | ||| || Sbjct 50218 ACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAA 50159 Query 8407 TATATCACAATGGCAAATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAG 8466 | |||| || || |||||| |||| || |||||||||||||| ||||| || |||| Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099 Query 8467 GCAAACAATCCTGTCTTCACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACA 8526 ||| | || || |||| || ||||| || || || || ||||| | | || || Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039 Query 8527 AGAACACATGAGTTCTTTGAAAAAAGCTTGATCTATTACAACAACAG 8573 | ||||||||| | |||||||| | ||||||||||||||| || Sbjct 50038 CGGACACATGAGATATTTGAAAAGTCATGGATCTATTACAACAATAG 49992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41828801006816