Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_032907.1
Length=13109
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 152 4e-33
>seq2708
Length=213413
Score = 152 bits (168), Expect = 4e-33
Identities = 242/347 (70%), Gaps = 0/347 (0%)
Strand=Plus/Minus
Query 8227 ATAGGTCGATTCTTCGCTCTTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAA 8286
||||| |||| || || | ||||| ||| || | |||| ||||| || || || |||
Sbjct 50338 ATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAA 50279
Query 8287 TATTTAATTAAATTACATTTCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA 8346
|| | || || || ||||| || || | ||| || | ||| |||| |||||||||
Sbjct 50278 TACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTA 50219
Query 8347 AACACAGTTGTTaaaaaaaTGCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGAC 8406
| |||||| | ||||||| | || | || ||||||||| | | ||| ||
Sbjct 50218 ACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAA 50159
Query 8407 TATATCACAATGGCAAATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAG 8466
| |||| || || |||||| |||| || |||||||||||||| ||||| || ||||
Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099
Query 8467 GCAAACAATCCTGTCTTCACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACA 8526
||| | || || |||| || ||||| || || || || ||||| | | || ||
Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039
Query 8527 AGAACACATGAGTTCTTTGAAAAAAGCTTGATCTATTACAACAACAG 8573
| ||||||||| | |||||||| | ||||||||||||||| ||
Sbjct 50038 CGGACACATGAGATATTTGAAAAGTCATGGATCTATTACAACAATAG 49992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41828801006816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |