Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_033006.1
Length=11332
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 125 5e-25
>seq2708
Length=213413
Score = 125 bits (138), Expect = 5e-25
Identities = 220/318 (69%), Gaps = 2/318 (1%)
Strand=Plus/Minus
Query 6439 ATGTCCTGGGCCTTGAGGGAATATTTTGTCGTCACTGAGTATTTGATTAAATTACATTTT 6498
||||||||| | | || || ||||| | ||||| || |||| || || ||||||
Sbjct 50317 ATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTT 50258
Query 6499 ATTCCTCTTTTTAAGGGTCTGACTGTCGCTGATGACATGACAACACTAATCAAGAAGATG 6558
|||| | || |||||||||||||| |||||||| | || ||| | || || |||
Sbjct 50257 GTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATG 50198
Query 6559 ATGGATAATTCTTCAGGACAAGGATTAGATGATTATTCCAGAGTTTCTTATGCGAACCAT 6618
|| || | || | ||||||||| | ||||||| | || | |||||| |||
Sbjct 50197 ATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCAT 50138
Query 6619 TTAGATTATGAGAAGTGGAATAACTATCAGCGTATAGAATCCAACGGGCCTA-CATTCAG 6677
|||| || ||||| |||||||| ||||| | | ||| | |||| | || | ||||||
Sbjct 50137 GTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT-CAACAGACCCAGTATTCAG 50079
Query 6678 AGTAATGGGACAGTTTTTGGGTTATCCTAACCTAATATACAGAACTCATGAATTCTTTCA 6737
|| ||||| || || | || |||||| || |||| | || ||||| | ||| |
Sbjct 50078 GGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGA 50019
Query 6738 AAAATCTGTGATCTATTA 6755
||| || |||||||||
Sbjct 50018 AAAGTCATGGATCTATTA 50001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36145855595264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |