Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_033070.1
Length=11145
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 210 2e-50
>seq2708
Length=213413
Score = 210 bits (232), Expect = 2e-50
Identities = 279/385 (72%), Gaps = 2/385 (1%)
Strand=Plus/Minus
Query 6225 AGCAAAAGAGCGAGAACTTAAAGAAGA-AGGAAGGTTCTTTGCACTTATGTCTTGGGAAA 6283
||| || ||||| || || |||| | |||||| || |||||| | ||||| ||| | |
Sbjct 50363 AGCGAAGGAGCGGGAG-TTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGA 50305
Query 6284 TCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGTTCA 6343
| |||| || ||||||||||| || || || ||||| || ||||| || ||||||
Sbjct 50304 TTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCA 50245
Query 6344 AAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAATACAG 6403
| |||||||| |||| || ||| | || || || || |||||| | |||| | |
Sbjct 50244 AGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGG 50185
Query 6404 AGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATAGATTACGAGA 6463
|||||||||| | | | ||||| | | |||| || | || ||| |||| |||||||
Sbjct 50184 CTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGA 50125
Query 6464 AATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTTGATGTAATGGGGAAAT 6523
||||||| || || || ||||||||| | | | || || || || |||||| |||
Sbjct 50124 AATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAAT 50065
Query 6524 TCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATATTCGAAAAGTCCTGGATGT 6583
|||||||||| || || | ||| | || || ||||| ||||| |||||||| ||||| |
Sbjct 50064 TCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCT 50005
Query 6584 ATTATAATCAGAGGGGAGATTTGAT 6608
|||| || | ||||| ||||| ||
Sbjct 50004 ATTACAACAATAGGGGTGATTTAAT 49980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35547477851256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |