Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq2708 210 2e-50 >seq2708 Length=213413 Score = 210 bits (232), Expect = 2e-50 Identities = 279/385 (72%), Gaps = 2/385 (1%) Strand=Plus/Minus Query 6225 AGCAAAAGAGCGAGAACTTAAAGAAGA-AGGAAGGTTCTTTGCACTTATGTCTTGGGAAA 6283 ||| || ||||| || || |||| | |||||| || |||||| | ||||| ||| | | Sbjct 50363 AGCGAAGGAGCGGGAG-TTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGA 50305 Query 6284 TCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGTTCA 6343 | |||| || ||||||||||| || || || ||||| || ||||| || |||||| Sbjct 50304 TTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCA 50245 Query 6344 AAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAATACAG 6403 | |||||||| |||| || ||| | || || || || |||||| | |||| | | Sbjct 50244 AGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGG 50185 Query 6404 AGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATAGATTACGAGA 6463 |||||||||| | | | ||||| | | |||| || | || ||| |||| ||||||| Sbjct 50184 CTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGA 50125 Query 6464 AATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTTGATGTAATGGGGAAAT 6523 ||||||| || || || ||||||||| | | | || || || || |||||| ||| Sbjct 50124 AATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAAT 50065 Query 6524 TCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATATTCGAAAAGTCCTGGATGT 6583 |||||||||| || || | ||| | || || ||||| ||||| |||||||| ||||| | Sbjct 50064 TCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCT 50005 Query 6584 ATTATAATCAGAGGGGAGATTTGAT 6608 |||| || | ||||| ||||| || Sbjct 50004 ATTACAACAATAGGGGTGATTTAAT 49980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35547477851256