Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_033103.1 Length=13161 Score E Sequences producing significant alignments: (Bits) Value seq2708 159 3e-35 >seq2708 Length=213413 Score = 159 bits (176), Expect = 3e-35 Identities = 268/386 (69%), Gaps = 4/386 (1%) Strand=Plus/Minus Query 8161 AAGGAGCGAGAAATAAAAAAGAAGGGACGGTTTTTCTCATTGATGTCCTGGAGTCTTCGA 8220 |||||||| || | || | | ||| | ||||| |||||||||||||| ||||| Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300 Query 8221 GATTATTTTGTGGTGACTGAGTATTTAATAAAGAAACACTTTGTTCCACTATTCTATGGT 8280 || || |||||| ||||||| || | || ||| || ||||||||| | ||| | ||| Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240 Query 8281 CTGACAATGGCCGATGATCTCACGACCGTGATGAGGAAGATGATGGAGAATGCAAATGGA 8340 ||||| |||| |||||||| || || |||||| || ||||| |||| | |||| Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180 Query 8341 CAGGGTCTGGA--TGATTATAGCTATATTTCTATTGCTAATCACATTGATTATGAGAAGT 8398 || || ||| ||||||| | | | ||||| ||||| | || || ||||| | Sbjct 50179 CAAGG--AGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122 Query 8399 GGAATAATCACCAACGGTTGGAATCAACCGGACCTGTGTTTCGTGTAATGGGACAATTCT 8458 |||||||||| || || || ||||| | || || || | || ||||| |||||| Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062 Query 8459 TAGGTTATCCAAATTTGATCTATAGGACACATGAGTTCTTTCAACAATCTCTGATCTACC 8518 | || ||||| | || ||| | ||||||||||| | ||| || | || |||||| Sbjct 50061 TTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTATT 50002 Query 8519 ATGGAGGTCGAGGGGATTTAATGACA 8544 | | | || |||||||||||| Sbjct 50001 ACAACAATAGGGGTGATTTAATGACA 49976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41995194646072