Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1110 141 2e-31 >seq1110 Length=63143 Score = 141 bits (156), Expect = 2e-31 Identities = 187/251 (75%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| ||| ||||| || |||| Sbjct 41506 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTCCAAATGCCTGAATATTTTGTGCAT 41565 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 |||||||| |||| ||| | | |||||| ||| ||||||| ||| | | |||||| Sbjct 41566 GGAATAATGAAATAAGACCT-CTGTTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATG 41624 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 41625 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 41684 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 41685 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 41743 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 41744 AAAGTTAGAGG 41754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914868715904