Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1110 125 3e-26
seq13389 89.7 2e-15
>seq1110
Length=63143
Score = 125 bits (138), Expect = 3e-26
Identities = 105/129 (81%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||||| || || |||||||||||||||||||||| | ||| ||| ||||| ||| |
Sbjct 44979 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 45038
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| |||
Sbjct 45039 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 45098
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 45099 TAGGGGCGA 45107
Score = 120 bits (132), Expect = 1e-24
Identities = 119/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| ||||||
Sbjct 44263 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 44322
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| | ||||||||||| ||||||| |||| ||||| ||||||| ||| || |
Sbjct 44323 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 44382
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||| || |||||||| || | | |||
Sbjct 44383 AGAGAGTTAAATAGTACGTGAAACTGCTTAGAGG 44416
>seq13389
Length=1837
Score = 89.7 bits (98), Expect = 2e-15
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||| | ||| ||||||||| ||| ||||| || |||| | || | |
Sbjct 1037 ATGGTGAACTATACTTGATCAGGGTGAAGTCAGGTGAAACCTTGATGGAAGACCGAAACA 978
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| |||||| |||||| |||| | ||| ||||||||||||
Sbjct 977 GTTCTGACGTGCAGATCGATTGTCAGAATTGAGTATAGGGGCGA 934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079223552900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |