Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1110 167 4e-39 seq1565 118 2e-24 >seq1110 Length=63143 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 42100 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 42041 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 42040 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 42001 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 42348 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 42290 Query 76 AAACTTCCATT--GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || | || ||| || || | | |||| | |||||||| || Sbjct 42289 AATCT--CGTTACTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 42246 >seq1565 Length=44745 Score = 118 bits (130), Expect = 2e-24 Identities = 83/95 (87%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223 ||| | ||||| ||||||||||| |||||| ||||| |||||||||||| |||||||||| Sbjct 23297 GTTTGATATCGAAATTAACCAGAGAAATCAGTCCACGAACTAAGAACGGGCATGCACCAC 23356 Query 224 CACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| || ||||||| |||||||||||| Sbjct 23357 TACCCATAGATTCGTGAAAGAGTTATCAATCTGTC 23391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796520587638