Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1110 167 4e-39
seq1565 118 2e-24
>seq1110
Length=63143
Score = 167 bits (184), Expect = 4e-39
Identities = 97/100 (97%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 42100 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 42041
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||| || |||||||||||||||||||||
Sbjct 42040 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 42001
Score = 96.9 bits (106), Expect = 6e-18
Identities = 87/106 (82%), Gaps = 5/106 (5%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct 42348 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 42290
Query 76 AAACTTCCATT--GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119
|| || | || ||| || || | | |||| | |||||||| ||
Sbjct 42289 AATCT--CGTTACTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 42246
>seq1565
Length=44745
Score = 118 bits (130), Expect = 2e-24
Identities = 83/95 (87%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223
||| | ||||| ||||||||||| |||||| ||||| |||||||||||| ||||||||||
Sbjct 23297 GTTTGATATCGAAATTAACCAGAGAAATCAGTCCACGAACTAAGAACGGGCATGCACCAC 23356
Query 224 CACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||| || ||||||| ||||||||||||
Sbjct 23357 TACCCATAGATTCGTGAAAGAGTTATCAATCTGTC 23391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796520587638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |