Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1110 304 2e-80 >seq1110 Length=63143 Score = 304 bits (336), Expect = 2e-80 Identities = 216/244 (89%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 33783 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 33724 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 33723 -TGAATGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 33665 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 33664 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 33605 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 |||||||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 33604 CCTGTGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 33546 Query 269 GGCC 272 |||| Sbjct 33545 GGCC 33542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854090724288