Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq469 259 8e-67 >seq469 Length=146635 Score = 259 bits (286), Expect = 8e-67 Identities = 206/244 (84%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| |||||| ||||| | |||| |||| |||||||||||||| ||||||||||||| Sbjct 103910 GTCATTAGTAGGTAAAAACAATCCTGCCTCACGACGGTCTAAACCCTGCTCACGTTCCCT 103969 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||| |||||| ||| ||||| |||||| | |||||||||||||||| Sbjct 103970 -TAAATGGGTGAACGATCCAAAACTTGGTGAATTTTGCTTCAGAATGATAGGAAGAGCCG 104028 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||| |||||||||||| || ||||||||||||||||||||| ||||||||||||||||| Sbjct 104029 ACATTGAAGGATCAAAATGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 104088 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 |||||||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 104089 CCTGTGGTAACTTTTCTGACACCTCTTG--TAAAAACTCTTTAAACCAAAAGGATCGATA 104146 Query 269 GGCC 272 |||| Sbjct 104147 GGCC 104150 Score = 230 bits (254), Expect = 4e-58 Identities = 155/172 (90%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 114002 ATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-TG 114060 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | |||||||||||| ||||||| ||||| |||| | ||||||||||||||||||| Sbjct 114061 AATGGGTGAACAATTAAACGCTTGGTGAATTTTGCTCCACAATGATAGGAAGAGCCGACA 114120 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 114121 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAG 114172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854126933760