Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_033486.1 Length=1672 Score E Sequences producing significant alignments: (Bits) Value seq8948 349 4e-93 seq22891 253 2e-64 >seq8948 Length=9862 Score = 349 bits (386), Expect = 4e-93 Identities = 403/541 (74%), Gaps = 14/541 (3%) Strand=Plus/Plus Query 388 GGAGGCATTTCGAATAATCCAAAAGCAAATGTTCGTAATCCCGTCGAAT-TAAAAGAAGA 446 || || ||||| ||||| ||||||| ||| ||||| | ||||| | || | |||||| Sbjct 8937 GGTGGTATTTCAAATAAACCAAAAGAAAACGTTCGCA-TCCCGCTGGATGTTAAAGAA-- 8993 Query 447 AACACCGAAGCCAACAACTATGCCAACTGGCCAACATTTGTCAAAAACAAATTCTGAGTT 506 ||| | ||||||||| || || || ||| |||| || || ||||||||||| Sbjct 8994 -----CGAGG-----AACTATGCCGACAGGACAGCATCTGTCGAAGACCAATTCTGAGTT 9043 Query 507 TAAAAATGATCCTTTATATTTAGAAGCATTCATGCCTTCTCCTTCCGAGGAGTTGGTTCC 566 ||||| ||||||||||||||||| || ||| | ||| | || || || || ||||| || Sbjct 9044 GAAAAACGATCCTTTATATTTAGAGGCGTTCTTTCCTACACCATCAGAAGAATTGGTGCC 9103 Query 567 AATAGCCGAAGAGTTAAATCATTTTCCGGGTTTTGATGGTTTAACCACATTAATTGAAGA 626 || || ||||| || || |||||||||| || ||||||||| | ||||||||| | || Sbjct 9104 GATTGCAGAAGAATTTAACCATTTTCCGGTGTTGGATGGTTTACCTACATTAATTAACGA 9163 Query 627 AACATATGAAAATTTTTCTGCACATAATTTAAACTTTAAACGTTCTGTATCTTTATCTGC 686 |||||||||||| |||||||||||||||||||| ||||||||| |||||| | || || Sbjct 9164 AACATATGAAAACTTTTCTGCACATAATTTAAATTTTAAACGTAGCGTATCTCTTTCCGC 9223 Query 687 TTATTCTTATTATATTACTGTTTTGTCTTGGGCCCGTGTTTTATATTTGAAGAAAATGAA 746 ||| | ||||||||| |||| || || ||||| || || ||| |||| |||||| | || Sbjct 9224 GTATGCCTATTATATTGCTGTATTTTCATGGGCACGCGTATTACATTTAAAGAAATTAAA 9283 Query 747 TAAATATAAATTAACTACTAACGAATTGGAGTTTATTGAAATGGTTTATGAACAAGGCAA 806 |||||| || |||||| | || | |||| ||||| | ||||||| || || || Sbjct 9284 TAAATAACGCTTGACTACTGAAAAACTTCAGTTCATTGACGTTTTTTATGAGCAGGGAAA 9343 Query 807 TTTCTTATTACCTAAGAGTGTAATAATTTATCTTTCTGGTTTTGGTAATTTTAACATCCC 866 ||| || | | || | || | || | | | || ||| | |||||||||| || || Sbjct 9344 TTTTATACTTTCAAAAACGGTTACGATATTTTTATCAGGTCTCGGTAATTTTACGATACC 9403 Query 867 TTCAGGCGTTGAATCAAAATTTAATTTAAAACCATATACTTATGACGAATTAGGATATTT 926 |||| | |||||| | ||||| ||| |||| |||| |||||||||| ||||| || Sbjct 9404 TTCAAGTGTTGAAACTAAATTCAATACAAAATATTATAGTTATGACGAACATGGATAATT 9463 Query 927 T 927 | Sbjct 9464 T 9464 >seq22891 Length=1278 Score = 253 bits (280), Expect = 2e-64 Identities = 320/438 (73%), Gaps = 4/438 (1%) Strand=Plus/Plus Query 462 AACTATGCCAACTGGCCAACATTTGTCAAAAACAAATTCTGAGTTTAAAAATGATCCTTT 521 ||||||||| || ||||||||||| |||||||| ||||| || || || || ||||| | Sbjct 198 AACTATGCCTACGGGCCAACATTTATCAAAAACCAATTCCGAATTAAAGAACAATCCTCT 257 Query 522 ATATTTAGAAGCATTCATGCCTTCTCCTTCCGAGGAGTTGGTTCCAATAGCCGAAGAGTT 581 ||| |||| || ||||| || | || | || || ||||| ||||| || || ||||| Sbjct 258 TTATCTAGAGGCTTTCATTCCAACACCAGCGGAAGAATTGGTCCCAATTGCAGAGGAGTT 317 Query 582 AAATCATTTTCCGGGTTTTGATGGTTTAACCACATTAATTGAAGAAACATATGAAAATTT 641 || ||||||| || || |||||||| || || |||||| | |||||||| |||||||| Sbjct 318 GAACTATTTTCCAGGGTTAGATGGTTTGACAACTTTAATTAATGAAACATACGAAAATTT 377 Query 642 TTCTGCACATAATTTAAACTTTAAACGTTCTGTATCTTTATCTGCTTATTCTTATTATAT 701 |||||||| ||||||| |||||| | || || |||| || | | ||||| || Sbjct 378 CTCTGCACAAAATTTAAGTTTTAAAAGAAGCGTGCCTATATCAGCACACACATATTACAT 437 Query 702 TACTGTTTTGTCTTGGGCCCGTGTTTTATATTTGAAGAAAATGAATAAATATAAATTAAC 761 | | || || | ||||| ||| || ||||||| |||||| | || |||| |||||| Sbjct 438 TTCAGTGTTTTAATGGGCTCGTATTCTATATTTAAAGAAATTAAACAAATGCGGATTAAC 497 Query 762 TACTAACGAATTGGAGTTTATTGAAATGGTTTATGAACAAGGCAATTTCTTATTACCTAA 821 ||| | ||| | | ||||| || | |||||||||| ||||||| | | | || | Sbjct 498 TACCGAGGAACTACAATTTATCGATGTAATTTATGAACAGGGCAATTACATCCTTCC--A 555 Query 822 GAGTGTAATAATTTATCTT--TCTGGTTTTGGTAATTTTAACATCCCTTCAGGCGTTGAA 879 | | | || |||| || || | ||| || |||||||| || ||||| | |||||| Sbjct 556 AAATCGATTACCTTATATTTATCAGATTTCGGAAATTTTAAAATACCTTCTTGTGTTGAA 615 Query 880 TCAAAATTTAATTTAAAA 897 ||||| ||||| ||| || Sbjct 616 TCAAAGTTTAAATTACAA 633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5239820083680