Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq315711 127 7e-27 seq350694 109 2e-21 seq350613 109 2e-21 seq374206 105 2e-20 seq89457 105 2e-20 seq365352 93.3 1e-16 seq360176 93.3 1e-16 >seq315711 Length=822 Score = 127 bits (140), Expect = 7e-27 Identities = 85/93 (91%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 763 Query 433 -CCTTAAGAGAGTCATAGT---TACTCCCGCCG 461 |||||| |||||||| | | ||||||||| Sbjct 762 TCCTTAAATGAGTCATAATACCTCCTCCCGCCG 730 Score = 89.7 bits (98), Expect = 2e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| Sbjct 61 GTCATAGTTACTCCCGCCGTTTACCTGCGCTTCATTGAATTTCTTCACGTTGACATTCA 3 >seq350694 Length=1113 Score = 109 bits (120), Expect = 2e-21 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 60 >seq350613 Length=1114 Score = 109 bits (120), Expect = 2e-21 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1114 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 1055 >seq374206 Length=1884 Score = 105 bits (116), Expect = 2e-20 Identities = 58/58 (100%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 58 >seq89457 Length=276 Score = 105 bits (116), Expect = 2e-20 Identities = 58/58 (100%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 276 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 219 >seq365352 Length=1390 Score = 93.3 bits (102), Expect = 1e-16 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| || Sbjct 61 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTTCATTGAATTTCTTCACGTT 2 Query 494 G 494 | Sbjct 1 G 1 >seq360176 Length=1265 Score = 93.3 bits (102), Expect = 1e-16 Identities = 80/98 (82%), Gaps = 7/98 (7%) Strand=Plus/Plus Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 || ||||| | || || || |||||| |||||| |||||| || ||||||||||||| Sbjct 1170 TGCGAATCATTTGAAACCTTTAATGCGC--CACTAAATAGATGGCGTGGCATTTGGCTAC 1227 Query 434 CTTAA-----GAGAGTCATAGTTACTCCCGCCGTTTAC 466 ||||| |||||||||||||||||||||||||||| Sbjct 1228 CTTAATTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1628955743520