Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1305 131 7e-28 seq2426 129 2e-27 >seq1305 Length=8880 Score = 131 bits (144), Expect = 7e-28 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||| ||| | |||||| || ||||||||||| | ||||||| ||||||| Sbjct 3521 GAGTCATGTTGCTTGATAGTGCAGCATAAAGTGGGAGGTAAACTCCTTCTAAGGCTAAAT 3580 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 3581 ATTACCATGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 3640 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGT 186 ||||||| ||| || |||||||| ||| Sbjct 3641 AGAGAGTCAAATAGTACGTGAAACTGT 3667 Score = 129 bits (142), Expect = 2e-27 Identities = 97/114 (85%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| ||||| Sbjct 4198 GACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAG 4257 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || ||| |||||| ||||||||||||| ||| | ||||| |||||||||| Sbjct 4258 GACCGAAGCAGTTCTGACGTGCAAATCGATTGTCGGAATTGGGCATAGGGGCGA 4311 >seq2426 Length=1197 Score = 129 bits (142), Expect = 2e-27 Identities = 97/114 (85%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| ||||| Sbjct 891 GACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAG 832 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || ||| |||||| ||||||||||||| ||| | ||||| |||||||||| Sbjct 831 GACCGAAGCAGTTCTGACGTGCAAATCGATTGTCGGAATTGGGCATAGGGGCGA 778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079892814350